{"id":"W3122291333","doi":"10.2139/ssrn.3696748","title":"Single-Cell RNA Sequencing of Developing Ears Facilitates Functional Analysis and Trait Candidate Gene Discovery in Maize","year":2020,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Gene; Genetics; Candidate gene; Trait; Computational biology; RNA; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003451336,0.0001428595,0.000229,0.0001031848,0.00006414085,0.00003406225,0.0001120141,0.00008448408,0.000005394384],"category_scores_gemma":[0.00003603934,0.0001364468,0.0001324727,0.0002724512,0.000053265,0.00001665515,0.000028862,0.0003958558,4.1941e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000169404,"about_ca_system_score_gemma":0.0009182709,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000177851,"about_ca_topic_score_gemma":0.001407616,"domain_scores_codex":[0.9985529,0.00005960905,0.0003219749,0.0002516323,0.0001341523,0.0006797293],"domain_scores_gemma":[0.9996816,0.00001453281,0.0001113556,0.00007495383,0.00004847943,0.00006911164],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001827331,0.00002437667,0.01577722,0.00001768911,0.0003231699,0.000003042239,0.0001804315,0.0008798164,0.9808174,0.0001512249,0.000003260399,0.001639635],"study_design_scores_gemma":[0.002676585,0.001087131,0.01181581,0.00002985818,0.000366307,0.0001112691,0.002193574,0.0009195658,0.9770127,0.002877352,0.0003331198,0.0005767517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9263214,0.002026309,0.07127862,0.0002103959,0.0000368485,0.00004984934,0.00001958712,0.000003510577,0.00005351299],"genre_scores_gemma":[0.9974825,0.001492259,0.0006043568,0.0001339826,0.00009237116,0.000001476512,0.00005118322,0.0000136802,0.0001281716],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07116116,"threshold_uncertainty_score":0.5564139,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01545702070515355,"score_gpt":0.2043062443919759,"score_spread":0.1888492236868223,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}