{"id":"W3122953849","doi":"10.3168/jds.2020-19381","title":"Economic losses due to Johne's disease (paratuberculosis) in dairy cattle","year":2021,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Genome Prairie; Genome British Columbia; Genome Canada","keywords":"Mycobacterium avium subspecies paratuberculosis; Paratuberculosis; Culling; Herd; Dairy cattle; Milk production; Livestock; Biology; Cattle Diseases; Mycobacterium avium subsp. paratuberculosis; Veterinary medicine; Animal science; Agricultural science; Geography; Mycobacterium; Medicine; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008146274,0.00009480708,0.0002847034,0.000416843,0.00007634257,0.0001138469,0.0002991773,0.00002630916,0.0005973768],"category_scores_gemma":[0.001596866,0.00007728233,0.0001010179,0.0006773123,0.000173135,0.0005786569,0.0001279351,0.000235475,0.0001953556],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003060358,"about_ca_system_score_gemma":0.003222957,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000331467,"about_ca_topic_score_gemma":0.00006636161,"domain_scores_codex":[0.9984141,0.00004566229,0.0003786933,0.0002396525,0.0005457697,0.0003761495],"domain_scores_gemma":[0.9981124,0.0001388042,0.00009415243,0.0003005309,0.0002618574,0.001092248],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007876279,0.0007051158,0.8988551,0.0001310316,0.00003501057,0.006852116,0.0004859771,0.0007270823,0.05064487,0.0002147948,0.03566751,0.00489372],"study_design_scores_gemma":[0.0007900519,0.0002776928,0.9743646,0.0002796513,0.00002386609,0.0005838533,0.0001916249,0.00008153085,0.01777628,0.0001708937,0.00535602,0.0001039448],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9885047,0.0006409922,0.00003396011,0.008710237,0.0003717526,0.00009363574,0.00001510022,0.000004666689,0.001624949],"genre_scores_gemma":[0.9974185,0.0002192519,0.0007749471,0.001031287,0.0002866138,0.000003874797,0.000001630376,0.000006857239,0.0002570493],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07550944,"threshold_uncertainty_score":0.6540858,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02185679350038787,"score_gpt":0.3185482352807662,"score_spread":0.2966914417803783,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}