{"id":"W3123142366","doi":"10.1098/rsos.202212","title":"Superinfection and the evolution of an initial asymptomatic stage","year":2021,"lang":"en","type":"article","venue":"Royal Society Open Science","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Fogarty International Center; Natural Sciences and Engineering Research Council of Canada; Science and Technology Directorate; Centers for Disease Control and Prevention; Wellcome Trust; National Institutes of Health; National Science Foundation; Microsoft; James S. McDonnell Foundation; Royal Society; U.S. Department of Homeland Security","keywords":"Superinfection; Biology; Asymptomatic; Host (biology); Immunity; Pathogen; Latency (audio); Evolutionary biology; Immunology; Genetics; Virus; Immune system; Medicine; Computer science; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007046658,0.00005066976,0.00007068687,0.000005291323,0.0002332994,0.00008281234,0.0002989517,0.0000414738,0.00002074808],"category_scores_gemma":[0.0001009032,0.00003902507,0.0000413249,0.000158731,0.0007314864,0.00001127596,0.0004308868,0.00003859046,9.793972e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002604616,"about_ca_system_score_gemma":0.0003286701,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002106106,"about_ca_topic_score_gemma":0.0001257734,"domain_scores_codex":[0.9993587,0.00005800028,0.0001038069,0.0002206729,0.0001471049,0.0001116754],"domain_scores_gemma":[0.9995413,0.000008637621,0.00004163869,0.0002311975,0.0001304692,0.00004678813],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0001677379,0.0003585563,0.01847347,0.00008957161,0.00009034552,0.000001649105,0.002613581,0.01164413,0.9232729,0.03311275,0.0006790604,0.00949627],"study_design_scores_gemma":[0.005054125,0.0005763813,0.2047181,0.00002875431,0.00005135499,0.00005676383,0.009521676,0.6598633,0.114397,0.00169624,0.003555994,0.0004803148],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.98533,0.0001385763,0.01120761,0.0001061001,0.00007309901,0.0001267207,0.000007177176,0.000003358514,0.003007354],"genre_scores_gemma":[0.9966411,0.00002910029,0.002249594,0.000137528,0.00002816448,0.000006260689,0.0000109093,0.000003131347,0.0008942022],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8088759,"threshold_uncertainty_score":0.2695192,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007122855352006152,"score_gpt":0.2870082697254472,"score_spread":0.2798854143734411,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}