{"id":"W3123236804","doi":"10.3390/v13020193","title":"Investigating the Diversity and Host Range of Novel Parvoviruses from North American Ducks Using Epidemiology, Phylogenetics, Genome Structure, and Codon Usage Analysis","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Environment and Climate Change Canada; University of Guelph; Memorial University of Newfoundland","funders":"Ocean Frontier Institute","keywords":"Biology; Subfamily; Clade; Phylogenetic tree; Parvoviridae; Phylogenetics; Genome; Host (biology); Genetics; Evolutionary biology; Zoology; Virology; Parvovirus; Virus; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000171885,0.0002202211,0.0001683648,0.0009860449,0.0003889439,0.0004588368,0.0001232663,0.0002004107,0.0003449832],"category_scores_gemma":[0.0003016994,0.0001136227,0.000128911,0.000447646,0.0002481671,0.0002492591,0.0002103729,0.0001732748,0.00008585784],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002397058,"about_ca_system_score_gemma":0.0001782905,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004060886,"about_ca_topic_score_gemma":0.008638242,"domain_scores_codex":[0.9998191,0.00002459052,0.00001648243,0.0000726416,0.00003278722,0.00003442842],"domain_scores_gemma":[0.9996725,0.00008380788,0.000112435,0.00001871316,0.00005142164,0.00006116348],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001939683,0.00003461969,0.846889,0.00008169452,0.00004265187,0.0003395617,0.000961736,0.0001415992,0.141439,0.00004190253,0.00003450702,0.009799777],"study_design_scores_gemma":[0.000002038626,0.0001009804,0.9935783,0.000009277515,0.0000245414,0.0009293943,0.0006474996,0.0002779875,0.003736462,0.00002517863,0.0006634649,0.000004737118],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995224,0.0001184556,0.0001042964,0.000002735012,7.760589e-7,0.000002733468,0.00007389432,0.000001230206,0.0001734455],"genre_scores_gemma":[0.9989501,0.0001534149,0.0004539131,0.000006885487,0.000002169153,0.000004212037,0.000268327,0.000001417253,0.000159661],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004060886,"threshold_uncertainty_score":0.008074522,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1311573850755829,"score_gpt":0.2851396295032885,"score_spread":0.1539822444277056,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}