{"id":"W3123326768","doi":"10.1002/mds.28488","title":"The Parkinson's Disease <scp>DNA</scp> Variant Browser","year":2021,"lang":"en","type":"article","venue":"Movement Disorders","topic":"Parkinson's Disease Mechanisms and Treatments","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; National Institute on Aging; Montreal Neurological Institute and Hospital; Feinberg School of Medicine; University of California, San Francisco; University of Illinois at Urbana-Champaign; National Institutes of Health; Universitat Autònoma de Barcelona; Al-Farabi Kazakh National University; Tartu Ülikool; Centro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas; Centre National de la Recherche Scientifique; Van Andel Research Institute; Oulun Yliopisto; Tel Aviv University; Texas Children's Hospital; McGill University; Murdoch University; Universidad de Granada; Leids Universitair Medisch Centrum; Universiteit Leiden; Eberhard Karls Universität Tübingen; Universidad de Sevilla; Helsingin Yliopisto; Institut National de la Santé et de la Recherche Médicale; Northwestern University; Universidad de Murcia; University College Dublin; University of Southern California; Deutsches Zentrum für Neurodegenerative Erkrankungen","keywords":"Parkinsonism; Disease; Parkinson's disease; DNA sequencing; Genotyping; Genomics; Genome browser; Genetics; Genotype; Computational biology; Biology; Gene; Bioinformatics; Medicine; Genome; Internal medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001448067,0.0002847491,0.0002431323,0.0000497165,0.0004038433,0.0001025566,0.0001441788,0.00005674873,0.0002196251],"category_scores_gemma":[0.0002019801,0.000204519,0.0002649316,0.0002526996,0.00007142545,0.00008047925,0.0001197562,0.0001285314,0.0001646702],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001230843,"about_ca_system_score_gemma":0.0002656646,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004851602,"about_ca_topic_score_gemma":0.0001454522,"domain_scores_codex":[0.9980059,0.00007859609,0.0002555052,0.0005298631,0.0005593479,0.0005708266],"domain_scores_gemma":[0.9985008,0.0001217245,0.00008524872,0.0007071489,0.00008192909,0.0005031243],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007997823,0.01340532,0.3964024,0.0005824923,0.005432281,0.008615004,0.001165713,0.0001453777,0.005012718,0.06692836,0.2557419,0.2457686],"study_design_scores_gemma":[0.002872201,0.0001148809,0.2266604,0.00005659271,0.0003820168,0.00000155052,0.0009623893,0.0003039832,0.001184996,0.0316341,0.7357187,0.00010815],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.933177,0.01555616,0.001429574,0.01707672,0.001241079,0.001572428,0.0001811725,0.0002940589,0.02947181],"genre_scores_gemma":[0.9661177,0.003385429,0.0002929264,0.01199908,0.0001370067,0.0003315873,0.0002008923,0.0000716351,0.01746369],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4799767,"threshold_uncertainty_score":0.8340043,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009592825689047131,"score_gpt":0.2342592391351496,"score_spread":0.2246664134461024,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}