{"id":"W3123375837","doi":"10.1186/s13071-020-04546-9","title":"Molecular characterization of Cryptosporidium isolates from humans in Ontario, Canada","year":2021,"lang":"en","type":"article","venue":"Parasites & Vectors","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto General Hospital; University of Toronto; Public Health Ontario; Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Cryptosporidium; Biology; Cryptosporidium parvum; Subtyping; Parasitology; Molecular epidemiology; Virology; Microbiology; Ribosomal RNA; Population; Sanger sequencing; Typing; Nested polymerase chain reaction; Polymerase chain reaction; Feces; Genotype; DNA sequencing; Gene; Genetics; Zoology; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002538096,0.0003850199,0.0002648588,0.001312075,0.002091748,0.0008110564,0.0005686146,0.0002947536,0.0009397043],"category_scores_gemma":[0.000808275,0.000206672,0.0001916963,0.002122697,0.0006881399,0.000133678,0.0003400315,0.0002765521,0.0002244555],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0115778,"about_ca_system_score_gemma":0.01377136,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9739792,"about_ca_topic_score_gemma":0.9803538,"domain_scores_codex":[0.9994478,0.00001778468,0.00002368781,0.00009087013,0.0002697865,0.0001501051],"domain_scores_gemma":[0.9992581,0.00003371448,0.0000890693,0.00001709271,0.0004932696,0.0001087134],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003681559,0.00007298213,0.9402838,0.000297608,0.00004559133,0.001598097,0.004208436,0.0003928354,0.027252,0.0002179449,0.002984935,0.02227761],"study_design_scores_gemma":[0.00001306257,0.00008778401,0.988565,0.00004589132,0.00002708386,0.0007490771,0.00211909,0.0003431567,0.001709989,0.00002796172,0.006303294,0.000008644312],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9879199,0.0009161736,0.0005501166,0.0002350216,0.00001673754,0.0002098695,0.004700788,0.00002191517,0.005429542],"genre_scores_gemma":[0.9909409,0.0008926465,0.001286978,0.0001723731,0.000009076327,0.00003434496,0.00428683,0.00001007475,0.002366714],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02602082,"threshold_uncertainty_score":0.08400321,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005705157890402061,"score_gpt":0.2039923444680251,"score_spread":0.198287186577623,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}