{"id":"W3123834293","doi":"10.1007/s00122-020-03723-9","title":"Genome-wide association study for resistance to the Meloidogyne javanica causing root-knot nematode in soybean","year":2021,"lang":"en","type":"article","venue":"Theoretical and Applied Genetics","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval; University of Guelph","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Empresa Brasileira de Pesquisa Agropecuária; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Biology; Genetics; Germplasm; Single-nucleotide polymorphism; Meloidogyne javanica; Haplotype; Locus (genetics); Association mapping; Candidate gene; Gene; Genotyping; Genome-wide association study; Quantitative trait locus; Nematode; Genotype; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003759587,0.000111015,0.0001850739,0.000007350597,0.000238316,0.00009534933,0.00009940308,0.00004057541,0.00005546767],"category_scores_gemma":[0.00009432044,0.00004587664,0.00002833443,0.0002437583,0.00004552512,0.00001238807,0.0001689728,0.00006188943,0.000007566155],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001967495,"about_ca_system_score_gemma":0.000003606947,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":9.781663e-7,"about_ca_topic_score_gemma":0.0006172733,"domain_scores_codex":[0.9990576,0.00005719099,0.0002223813,0.0002636302,0.0001685977,0.0002305927],"domain_scores_gemma":[0.9993105,0.0004623554,0.00005498022,0.00006559627,0.00005814519,0.00004840747],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","study_design_scores_codex":[0.0006311949,0.0013452,0.179569,0.0001317103,0.000293993,0.00002156816,0.005863553,0.0001391846,0.2662196,0.5275791,0.002162942,0.01604294],"study_design_scores_gemma":[0.0007458074,0.0001528743,0.9068081,0.00002249919,0.00009990288,4.7618e-7,0.005265691,0.00005631896,0.007576077,0.04285772,0.03598455,0.0004299612],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9877089,0.0001204248,0.0001762973,0.009465113,0.00003870718,0.000581452,0.00001459163,0.00001986169,0.001874635],"genre_scores_gemma":[0.9981253,0.00004255787,0.0001061081,0.0009490625,0.000115501,0.00008066279,0.00002662434,0.000001815818,0.0005523766],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7272392,"threshold_uncertainty_score":0.1870795,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01217846176801996,"score_gpt":0.2254956352042684,"score_spread":0.2133171734362485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}