{"id":"W3123834293","doi":"10.1007/s00122-020-03723-9","title":"Genome-wide association study for resistance to the Meloidogyne javanica causing root-knot nematode in soybean","year":2021,"lang":"en","type":"article","venue":"Theoretical and Applied Genetics","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval; University of Guelph","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Empresa Brasileira de Pesquisa Agropecuária; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Biology; Genetics; Germplasm; Single-nucleotide polymorphism; Meloidogyne javanica; Haplotype; Locus (genetics); Association mapping; Candidate gene; Gene; Genotyping; Genome-wide association study; Quantitative trait locus; Nematode; Genotype; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006309235,0.0003439255,0.0003016065,0.001080138,0.0005035239,0.0005247836,0.000348695,0.0004771697,0.001249787],"category_scores_gemma":[0.0006460325,0.0002158313,0.0007988453,0.001228285,0.0002922567,0.0001573291,0.000329456,0.0006812094,0.0001136647],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002654732,"about_ca_system_score_gemma":0.0003103864,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009136069,"about_ca_topic_score_gemma":0.01313377,"domain_scores_codex":[0.9994646,0.0001209952,0.00005596139,0.0002385757,0.00006186988,0.00005802025],"domain_scores_gemma":[0.9992917,0.0002061597,0.0002161683,0.0000616387,0.00006841273,0.0001559339],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00150161,0.0001568853,0.948184,0.00004298188,0.001004617,0.0006340476,0.0003250659,0.0001085826,0.04462879,0.0001248657,0.0001253378,0.003163241],"study_design_scores_gemma":[0.00001805765,0.00007711172,0.998693,0.000003206994,0.0002346097,0.0001850839,0.0001299385,0.000205886,0.0003044669,0.00002022326,0.0001243962,0.000003954268],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993376,0.0001413971,0.0001438821,0.00003507335,0.000007568063,0.000002671572,0.0001246525,0.000005285889,0.0002018494],"genre_scores_gemma":[0.9995489,0.00004892115,0.0001013788,0.00001446763,0.000003363024,0.000002005439,0.00008987684,0.000003184205,0.0001879454],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009136069,"threshold_uncertainty_score":0.01816583,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01217846176801996,"score_gpt":0.2254956352042684,"score_spread":0.2133171734362485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}