{"id":"W3124384599","doi":"10.20944/preprints201703.0216.v1","title":"A Dysbiotic Mycobiome Dominated by <em>Candida albicans</em> is Identified within Oral Squamous Cell Carcinomas","year":2017,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"University of Peradeniya","keywords":"Biology; Malassezia; Microbiology; Alternaria; Ascomycota; Candida albicans; Basidiomycota; Botany; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001938988,0.0001746139,0.0002621933,0.001492452,0.0003235966,0.0007285755,0.000196264,0.0002747306,0.001639687],"category_scores_gemma":[0.000429216,0.0001514561,0.0001730831,0.001222933,0.0003702837,0.0002350453,0.000346231,0.000188685,0.000324357],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001541034,"about_ca_system_score_gemma":0.0001715099,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001164451,"about_ca_topic_score_gemma":0.00177427,"domain_scores_codex":[0.9997342,0.00001818884,0.00003287831,0.00007659307,0.00008732019,0.000050739],"domain_scores_gemma":[0.999472,0.00006921911,0.0002528296,0.00003955995,0.0001011385,0.00006531608],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005236568,0.00003451284,0.4651302,0.0003970125,0.0000924616,0.001508468,0.0004830381,0.0001188942,0.5102633,0.0001287916,0.0003283506,0.02099127],"study_design_scores_gemma":[0.000005090217,0.000123228,0.9628583,0.00004594764,0.00008795412,0.003806845,0.000726407,0.0002770984,0.02987131,0.00009915399,0.002087971,0.00001070462],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971263,0.00116548,0.0004650497,0.00002384919,0.000005731998,0.00001104505,0.0003732049,0.00002314739,0.0008062519],"genre_scores_gemma":[0.9983218,0.0003828374,0.0007123289,0.0000188932,0.000006942683,0.00001039919,0.0003347502,0.000008821344,0.0002032344],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001639687,"threshold_uncertainty_score":0.005485296,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05537154199914411,"score_gpt":0.321303396440677,"score_spread":0.2659318544415328,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}