{"id":"W3125005700","doi":"10.3389/fvets.2020.625067","title":"Serum Metabolomic Profiles of Paratuberculosis Infected and Infectious Dairy Cattle by Ambient Mass Spectrometry","year":2021,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Ministero della Salute","keywords":"Paratuberculosis; Subclinical infection; Feces; Herd; Biology; Metabolomics; Veterinary medicine; Disease; Infectious dose; Dairy cattle; Immunology; Physiology; Medicine; Virology; Animal science; Microbiology; Mycobacterium; Internal medicine; Bacteria; Bioinformatics; Virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004305343,0.0001436321,0.0003714321,0.000563718,0.00008654148,0.00004567562,0.0001461607,0.0000662208,0.0001168426],"category_scores_gemma":[0.0004914185,0.0001335912,0.00005108948,0.002039094,0.0005961301,0.0003066104,0.0001748507,0.0002069778,0.000004796032],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001442196,"about_ca_system_score_gemma":0.0004182737,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000513321,"about_ca_topic_score_gemma":0.00000163101,"domain_scores_codex":[0.9983069,0.00009498352,0.0002491928,0.0004701716,0.0004244985,0.0004542172],"domain_scores_gemma":[0.9991552,0.00005508434,0.00006428569,0.0003429856,0.0001359241,0.0002465684],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007745085,0.0001484056,0.4418766,0.00009193722,0.00001931623,0.00008076691,0.00007644518,0.000001437331,0.5547143,0.00001786476,0.002099172,0.0007962779],"study_design_scores_gemma":[0.0008272016,0.001193784,0.8086044,0.00008640008,0.00002122346,0.0001860963,0.0002198898,0.0002307207,0.1870119,0.0001230221,0.001349624,0.0001456865],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950574,0.002403409,0.0004401925,0.0002520357,0.000399776,0.0002545749,0.00005553969,0.00002653655,0.00111053],"genre_scores_gemma":[0.9899359,0.001475162,0.008239713,0.00009518427,0.0000239174,0.00002783807,0.00001829464,0.00001034799,0.000173666],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3677024,"threshold_uncertainty_score":0.5447693,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01247846231691712,"score_gpt":0.2764360083739587,"score_spread":0.2639575460570415,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}