{"id":"W3125108974","doi":"10.1093/mmy/myaa120","title":"A novel TaqMan qPCR assay for rapid detection and quantification of pro-inflammatory microalgae <i>Prototheca</i> spp. in milk samples","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Národní Agentura pro Zemědělský Výzkum; Natural Environment Research Council; Sight Research UK; Ministry of Agriculture - Saskatchewan","keywords":"Biology; TaqMan; Microbiology; Mastitis; Multiplex; Genotype; Real-time polymerase chain reaction; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001126194,0.00009187809,0.0002349548,0.00001836968,0.00007674914,0.00001013724,0.0001317935,0.0002572926,0.0005485658],"category_scores_gemma":[0.001474771,0.00004545987,0.00005329962,0.0001753124,0.0001861117,0.00004185161,0.00006424703,0.0001354499,0.000003722994],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001677739,"about_ca_system_score_gemma":0.00004246614,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001811986,"about_ca_topic_score_gemma":0.007165924,"domain_scores_codex":[0.9987472,0.0002127561,0.0003696014,0.0003004587,0.0001634136,0.0002065611],"domain_scores_gemma":[0.998783,0.0008828109,0.0001082291,0.00005912231,0.00008157111,0.00008528635],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008071088,0.0001620064,0.001965179,0.00007726654,0.000008123299,0.000004186469,0.00007586584,3.843172e-7,0.8616942,0.001740357,0.0002014588,0.1339903],"study_design_scores_gemma":[0.00221485,0.0009837323,0.3135276,0.0001867431,0.00003479738,0.0001626928,0.00084797,0.0008113128,0.427703,0.005394655,0.2476984,0.000434344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910123,0.0005068203,0.00417751,0.003053497,0.0002710517,0.000704494,0.00006141297,0.00002807699,0.0001847767],"genre_scores_gemma":[0.9976931,0.0002107843,0.001029018,0.0004885637,0.000175098,0.0002406916,0.00006984765,0.000001369304,0.00009152264],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4339912,"threshold_uncertainty_score":0.600641,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03960362158448398,"score_gpt":0.2622983675124921,"score_spread":0.2226947459280081,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}