{"id":"W3125682813","doi":"10.20944/preprints201811.0336.v1","title":"Genome-Wide Association Studies for Pasmo Resistance in Flax (&lt;em&gt;Linum Usitatissimum L.&lt;/em&gt;)","year":2018,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; International Development Research Centre; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; China Scholarship Council; Western Grains Research Foundation; Genome Canada","keywords":"Quantitative trait locus; Biology; Linum; Genetics; Single-nucleotide polymorphism; Family-based QTL mapping; Locus (genetics); Genome-wide association study; Gene; Allele; Genotyping; Candidate gene; Genetic association; Genotype; Chromosome; Gene mapping; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001513807,0.0004546147,0.000648243,0.00005533493,0.0003227904,0.000114663,0.000723514,0.0005528749,0.0003586285],"category_scores_gemma":[0.003154386,0.000251916,0.0002786097,0.0003558664,0.0000778513,0.0001068442,0.0009649183,0.0003986707,0.000273962],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005687064,"about_ca_system_score_gemma":0.00005017275,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003295063,"about_ca_topic_score_gemma":0.003691885,"domain_scores_codex":[0.9964269,0.0002455981,0.0008566048,0.001265087,0.000590281,0.0006155698],"domain_scores_gemma":[0.9967998,0.001089551,0.0008269016,0.0003461858,0.0008174519,0.0001200949],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002011714,0.0002978297,0.8765284,0.0002618495,0.0003921604,0.000005360519,0.005004989,0.0001779326,0.1105382,0.0002559496,0.004090155,0.002246007],"study_design_scores_gemma":[0.0002928515,0.00005873851,0.936183,0.0001873868,0.00005455542,1.779277e-7,0.0005894909,0.00004180925,0.003862513,0.01745479,0.04076103,0.0005136246],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928785,0.001093897,0.0000263338,0.002294388,0.0007670659,0.001375047,0.0001960739,0.0001192052,0.001249474],"genre_scores_gemma":[0.9907267,0.0006183404,0.0007426364,0.0003412579,0.0008184236,0.0005434046,0.0004240568,0.000009097505,0.005776098],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1066757,"threshold_uncertainty_score":0.9999933,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09424462296211958,"score_gpt":0.3103070209942149,"score_spread":0.2160623980320953,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}