{"id":"W3126394916","doi":"10.1093/sysbio/syab001","title":"Long Branch Attraction Biases in Phylogenetics","year":2021,"lang":"en","type":"article","venue":"Systematic Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Attraction; Biology; Phylogenetics; Evolutionary biology; Zoology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.02927253,0.0007655041,0.001594369,0.002196346,0.001631823,0.003327268,0.001894536,0.002067691,0.003474408],"category_scores_gemma":[0.17903,0.0007572237,0.0008089067,0.00289442,0.006883008,0.005090706,0.003863415,0.004692041,0.0007177192],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001617276,"about_ca_system_score_gemma":0.0008936155,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001539566,"about_ca_topic_score_gemma":0.001517734,"domain_scores_codex":[0.9720951,0.02212627,0.0006793481,0.002255454,0.002516281,0.0003276502],"domain_scores_gemma":[0.8377739,0.1453027,0.005665947,0.006900835,0.003617545,0.0007390736],"domain_codex":null,"domain_gemma":"methods","domain_candidate":"methods","domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0002610277,0.0000497737,0.03318644,0.001017259,0.0007525466,0.0005667287,0.002829458,0.09298921,0.002502415,0.7007941,0.006600881,0.1584501],"study_design_scores_gemma":[0.00001655131,0.00004712827,0.005947989,0.0001921097,0.00004891445,0.000353088,0.0002216193,0.1088695,0.0007235368,0.8790224,0.004496082,0.00006102935],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.08338239,0.009603695,0.8909858,0.00526407,0.0004938615,0.00008325922,0.0002676386,0.0006524906,0.009266711],"genre_scores_gemma":[0.8876821,0.004453978,0.1021423,0.001802802,0.0008660473,0.0002215287,0.0003630364,0.0004505373,0.002017659],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.9707274,"threshold_uncertainty_score":0.1548098,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02812859695941371,"score_gpt":0.2786318828237367,"score_spread":0.250503285864323,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}