{"id":"W3126646762","doi":"10.1038/s41598-021-82522-8","title":"Detection of selection signatures for response to Aleutian mink disease virus infection in American mink","year":2021,"lang":"en","type":"article","venue":"Scientific Reports","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Agriculture and Agri-Food Canada; Agri-Futures Nova Scotia Association; Natural Sciences and Engineering Research Council of Canada; Mitacs; Compute Canada; Department of Agriculture, Nova Scotia","keywords":"Biology; Mink; American mink; Genetics; Genotyping; Gene; Virology; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001065104,0.0001179682,0.0002090692,0.0004584262,0.000188962,0.00003911301,0.00005226541,0.00009277386,0.000116804],"category_scores_gemma":[0.00147025,0.0001181312,0.0001241046,0.0007763024,0.0002029973,0.0000852732,0.00004142214,0.0001308579,0.00002169902],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000102607,"about_ca_system_score_gemma":0.00027263,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003385344,"about_ca_topic_score_gemma":0.001607109,"domain_scores_codex":[0.9983491,0.000392627,0.0004206161,0.0005148745,0.00005905899,0.0002637426],"domain_scores_gemma":[0.9989837,0.0001366636,0.0002146169,0.0003561143,0.0002710929,0.00003781544],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003204023,0.0001422602,0.002796419,0.00001942719,0.0000267391,0.00003025006,0.0002696193,0.00008664513,0.9860216,0.000004203721,0.001270334,0.006128483],"study_design_scores_gemma":[0.0002059121,0.0002277539,0.06884653,0.00004068682,0.00001945181,0.00009220059,0.0000789618,0.00001009164,0.8580511,0.00009340063,0.0722327,0.000101276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931672,0.0005357923,0.001135359,0.0001478446,0.004598885,0.0003376526,0.000009713403,0.00003680365,0.00003080143],"genre_scores_gemma":[0.9928614,0.000009435489,0.00006596354,0.00004373884,0.00001491369,0.00006413722,0.00005931381,0.0000114929,0.006869574],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1279706,"threshold_uncertainty_score":0.4817252,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008976898231705768,"score_gpt":0.2662400904848603,"score_spread":0.2572631922531545,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}