{"id":"W3126802974","doi":"10.1093/genetics/iyab001","title":"Heritability of DNA methylation in threespine stickleback ( <i>Gasterosteus aculeatus</i> )","year":2021,"lang":"en","type":"article","venue":"Genetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Bone and Joint Health Institute; University of Calgary; McGill University","funders":"Alberta Innovates; China Scholarship Council; Natural Sciences and Engineering Research Council of Canada; Fudan University; Canada Research Chairs","keywords":"Biology; DNA methylation; Genetics; Epigenetics; Genetic architecture; Gasterosteus; Stickleback; Heritability; Methylation; Epigenomics; Quantitative trait locus; Population; Genetic variation; Differentially methylated regions; Ecotype; CpG site; Evolutionary biology; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002572839,0.0001350293,0.0001875601,0.0000362357,0.00002395945,0.00001369117,0.0001138358,0.0001677473,0.00002975951],"category_scores_gemma":[0.0001622171,0.0001476173,0.00007574056,0.0002027461,0.00006091716,0.000002738739,0.0001285325,0.00007333214,0.000004047158],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001466779,"about_ca_system_score_gemma":0.000105614,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006263646,"about_ca_topic_score_gemma":0.0003368119,"domain_scores_codex":[0.9987918,0.000122329,0.000382386,0.0003379429,0.0001620297,0.000203508],"domain_scores_gemma":[0.9991227,0.00001976283,0.000102937,0.0004790474,0.0002168105,0.00005871947],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002128223,0.00009300494,0.03469073,0.0000333799,0.00001520036,0.000002117844,0.00005363386,0.001122682,0.95637,0.00002588838,0.0000241461,0.007547925],"study_design_scores_gemma":[0.000488049,0.0001676978,0.07579594,0.00001236249,0.00001423418,0.000001746626,0.00006181127,0.0001532271,0.9180358,0.0004997466,0.00463084,0.0001385237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882677,0.006382458,0.004155674,0.00009104507,0.0001411097,0.0001397221,0.00002787289,0.000004853358,0.0007896032],"genre_scores_gemma":[0.9924031,0.0008932221,0.00621536,0.00005366347,0.00009488769,0.000007682822,0.0001762308,0.00002031052,0.0001355071],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04110521,"threshold_uncertainty_score":0.6019658,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01464660065373777,"score_gpt":0.2669550453074749,"score_spread":0.2523084446537371,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}