{"id":"W3126838261","doi":"10.1002/1873-3468.14057","title":"Strain‐level immunomodulatory variation of gut bacteria","year":2021,"lang":"en","type":"article","venue":"FEBS Letters","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research","funders":"Canadian Institute for Advanced Research","keywords":"Biology; Bacteria; Strain (injury); Immune system; Gut flora; Microbiology; Phylogenetics; Gut bacteria; Host (biology); Genetics; Immunology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008047135,0.00007681247,0.00009647958,0.00001918417,0.00003292127,0.000009606069,0.00007633351,0.00007647933,0.00008436245],"category_scores_gemma":[0.0000171372,0.00008333768,0.00005943097,0.00004427225,0.00002782148,0.000002469147,0.00004250322,0.00004987877,0.00001015298],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001293975,"about_ca_system_score_gemma":0.00009893288,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002119756,"about_ca_topic_score_gemma":0.00001385976,"domain_scores_codex":[0.9994202,0.00004466738,0.0001577488,0.0001823764,0.00005103135,0.0001439221],"domain_scores_gemma":[0.9995937,0.000003732709,0.00006819809,0.0002519166,0.00005109303,0.00003139677],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001433217,0.00002495065,0.0004766247,0.00002648351,0.00003180698,0.000002903216,0.0000729582,0.000009523291,0.9966537,0.00005874468,0.002212941,0.0004150037],"study_design_scores_gemma":[0.0004375828,0.00005086967,0.61021,0.0000146186,0.00001238011,0.00001807131,0.00002849533,0.000003884286,0.3690217,0.0000133365,0.02005659,0.0001325261],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962853,0.0001505554,0.001828152,0.001170561,0.000245464,0.00005446043,0.00009806782,0.000004859824,0.0001625682],"genre_scores_gemma":[0.9938054,0.00003145324,0.002503085,0.002869205,0.0001529202,0.000002497307,0.0003953216,0.0000121476,0.000227987],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6276321,"threshold_uncertainty_score":0.3398412,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01384221385589245,"score_gpt":0.2376545567174512,"score_spread":0.2238123428615587,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}