{"id":"W3126973987","doi":"10.1094/mpmi-11-20-0314-sc","title":"<i>Proteobacteria</i> Contain Diverse flg22 Epitopes That Elicit Varying Immune Responses in <i>Arabidopsis thaliana</i>","year":2021,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Queen's University; Canada Research Chairs","keywords":"Epitope; Flagellin; Biology; Immunogenicity; Proteobacteria; Arabidopsis thaliana; Genetics; Immune system; Gene; Antigen","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002830637,0.0003882647,0.0004680567,0.0001053048,0.0004883553,0.0003488419,0.0004648838,0.0001672203,0.001850719],"category_scores_gemma":[0.0001902771,0.0002293355,0.0003306728,0.000584027,0.0000729975,0.0005756706,0.0003282767,0.0007159055,0.0002560769],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001762193,"about_ca_system_score_gemma":0.00005480831,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005121102,"about_ca_topic_score_gemma":0.007068236,"domain_scores_codex":[0.9974054,0.0005627237,0.0005853308,0.0006122024,0.0002141055,0.000620241],"domain_scores_gemma":[0.9986375,0.0005474064,0.0002376419,0.0002801072,0.0001590219,0.0001383545],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002346964,0.0003545714,0.002107505,0.00001022973,0.00008463398,0.0007137899,0.0001506742,0.00001989556,0.9906658,0.00005511411,0.001757493,0.003845604],"study_design_scores_gemma":[0.0004419612,0.0000823759,0.01592112,0.0003019165,0.00004818255,0.001366567,0.001416791,0.00004038287,0.8427666,0.00006547286,0.1370231,0.0005254549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992211,0.0004905688,0.00006423071,0.002350958,0.0008790324,0.0003171727,0.001454809,0.0001168309,0.002115367],"genre_scores_gemma":[0.9947269,0.0003039905,0.0003057445,0.001338209,0.0001046781,0.00006509887,0.001385028,0.000007433986,0.001762897],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1478992,"threshold_uncertainty_score":0.9990617,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02396459718186763,"score_gpt":0.2375987003486752,"score_spread":0.2136341031668076,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}