{"id":"W3127001983","doi":"10.3390/microorganisms9020342","title":"Unveiling the Bovine Epimural Microbiota Composition and Putative Function","year":2021,"lang":"en","type":"article","venue":"Microorganisms","topic":"Ruminant Nutrition and Digestive Physiology","field":"Agricultural and Biological Sciences","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Bundesministerium für Digitalisierung und Wirtschaftsstandort; Bundesministerium für Verkehr, Innovation und Technologie; Vlaamse regering; Iowa State University","keywords":"Lachnospiraceae; Biology; Campylobacter; Microbiology; Euryarchaeota; Metagenomics; Microbiome; 16S ribosomal RNA; Bacteria; Genetics; Firmicutes; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000604614,0.0000849069,0.00009555541,0.000004101634,0.0003009731,0.00005521093,0.00005543037,0.00004806479,0.000289553],"category_scores_gemma":[0.00001052167,0.00003040705,0.00003557399,0.0001641741,0.00009285546,0.00005771828,0.00005690239,0.00008159663,0.00007137578],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001198333,"about_ca_system_score_gemma":0.000005236938,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002293127,"about_ca_topic_score_gemma":0.00002185406,"domain_scores_codex":[0.9994234,0.00009407668,0.0001020283,0.0001997741,0.00004226221,0.0001384489],"domain_scores_gemma":[0.999706,0.0001134093,0.00003934035,0.00003029883,0.00007578535,0.00003512494],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002694999,0.00004266955,0.0004095575,0.000002287024,0.000006860377,0.000003921812,0.00004935833,3.780756e-7,0.994517,0.0004421581,0.0008233794,0.00367548],"study_design_scores_gemma":[0.0002225733,0.0001936317,0.2850567,0.00001302662,0.00001799433,0.0001064272,0.0008320773,0.00001079911,0.6977955,0.001468266,0.01414268,0.0001403375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992651,0.0005781924,0.00004812509,0.00624562,0.0001044017,0.00007709525,0.00003865615,0.00003184229,0.0002249953],"genre_scores_gemma":[0.9977577,0.00004873865,0.0001007802,0.001445894,0.0001198553,0.000002929857,0.0002528046,7.895105e-7,0.000270451],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2967215,"threshold_uncertainty_score":0.3170402,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0113204073496199,"score_gpt":0.2004276896215257,"score_spread":0.1891072822719058,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}