{"id":"W3127435865","doi":"10.1038/s41598-021-82607-4","title":"Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi","year":2021,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"The Scarborough Hospital; University of Toronto; University of British Columbia; Agriculture and Agri-Food Canada","funders":"Joint Genome Institute; Canadian Institute for Advanced Research; U.S. Department of Energy; Office of Science; National Science Foundation","keywords":"Biology; Phylogenetic tree; Zoospore; Obligate; Phylogenetics; Evolutionary biology; Phylum; Chytridiomycota; Fungus; Botany; Ascomycota; Gene; Genetics; Spore","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003018619,0.0004245134,0.0003481155,0.0007032536,0.0004868597,0.0007970443,0.0001982587,0.0003463586,0.0007084335],"category_scores_gemma":[0.000595688,0.0001277098,0.0003106111,0.001059195,0.000242866,0.0003544394,0.0006048178,0.0005961157,0.0003413125],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002353099,"about_ca_system_score_gemma":0.0003461561,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007253872,"about_ca_topic_score_gemma":0.001667751,"domain_scores_codex":[0.9998181,0.00001961932,0.00001164601,0.00007667895,0.000032949,0.00004101938],"domain_scores_gemma":[0.9996654,0.00009304043,0.00008211062,0.00004448884,0.00004173919,0.00007326474],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003983916,0.00005493377,0.04916994,0.0004004317,0.0001258337,0.0006194841,0.000549117,0.0006048712,0.9160963,0.001046191,0.0003106628,0.03062391],"study_design_scores_gemma":[0.00005198416,0.0002454559,0.9163486,0.0001337727,0.0003554292,0.001695592,0.001353898,0.005290938,0.04454261,0.002685046,0.02725366,0.00004302472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9858574,0.001576784,0.006697049,0.00009467739,0.00002298062,0.00002518876,0.00351316,0.0001045302,0.002108308],"genre_scores_gemma":[0.9864222,0.0006165291,0.007191905,0.00006584135,0.000007358521,0.00001996354,0.005338977,0.00003563763,0.0003014996],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007970443,"threshold_uncertainty_score":0.00236994,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02284330773764046,"score_gpt":0.2554242195564365,"score_spread":0.2325809118187961,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}