{"id":"W3127546082","doi":"10.1101/2021.01.28.428742","title":"Hyperpiliation reduces <i>Pseudomonas aeruginosa</i> pathogenicity by impeding type III secretion","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Canada","keywords":"Pilus; Virulence; Pseudomonas aeruginosa; Pilin; Microbiology; Biology; Secretion; Mutant; Type three secretion system; Pathogenicity island; Type VI secretion system; Motility; Gene; Genetics; Bacteria; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008102448,0.0003204214,0.0001913607,0.0001412137,0.00009824413,0.0002712865,0.000243132,0.0003106318,0.001599537],"category_scores_gemma":[0.0001272283,0.0001080639,0.0001936041,0.00006977682,0.0002437229,0.0001451572,0.000247782,0.0006728952,0.0002434287],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002964663,"about_ca_system_score_gemma":0.0002102831,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009975842,"about_ca_topic_score_gemma":0.0009436727,"domain_scores_codex":[0.9998245,0.00002660558,0.00001915186,0.00002767862,0.00005539106,0.00004667594],"domain_scores_gemma":[0.9998249,0.00002933349,0.0000562733,0.00002023205,0.00001631228,0.00005298991],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000464637,0.00002005081,0.00006795047,0.00001179492,0.000002047573,0.00001197867,0.000002762039,0.00001918656,0.9994823,0.00001977131,0.00002066346,0.0002950044],"study_design_scores_gemma":[0.000009514621,0.0004943146,0.004621864,0.000006433471,0.000009875728,0.0001049441,0.00002499559,0.0006065819,0.9929339,0.00002965241,0.001153399,0.000004658606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970355,0.0004849019,0.0009714747,0.0001130921,0.00002300697,0.00002199489,0.000241896,0.00009588715,0.001012149],"genre_scores_gemma":[0.9963482,0.0002453365,0.0009810578,0.00009580021,0.000008841927,0.00002571981,0.0003363733,0.00002802489,0.001930618],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001599537,"threshold_uncertainty_score":0.005351007,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01123185344915649,"score_gpt":0.2350309061009617,"score_spread":0.2237990526518052,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}