{"id":"W3128720796","doi":"10.1615/intjmedmushrooms.2021037759","title":"Deep Sequencing, Nested PCR, and Denaturing Gradient Gel Electrophoresis Reveal a Wider Distribution of Chinese Caterpillar Mushroom, Ophiocordyceps sinensis (Ascomycetes), in Native Soil Types","year":2021,"lang":"en","type":"article","venue":"International journal of medicinal mushrooms","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Hypocreales; Temperature gradient gel electrophoresis; Larva; Internal transcribed spacer; Botany; Host (biology); Mushroom; Nested polymerase chain reaction; Polymerase chain reaction; Ribosomal RNA; Ecology; Gene; 16S ribosomal RNA; Ascomycota; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000384005,0.0001836385,0.000476476,0.0002572126,0.00004766199,0.0000127204,0.0001713083,0.0001384404,0.00004248655],"category_scores_gemma":[0.001050064,0.0001397208,0.0001295139,0.000359408,0.00019766,0.0001127008,0.00006678683,0.0005098009,0.000001728988],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003521985,"about_ca_system_score_gemma":0.0002940876,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001275108,"about_ca_topic_score_gemma":0.0001556284,"domain_scores_codex":[0.9982093,0.0001023114,0.0007266532,0.000231008,0.000524517,0.0002062414],"domain_scores_gemma":[0.9979614,0.0002550176,0.0004330747,0.000137928,0.001067833,0.0001447734],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002892484,0.0008966458,0.5482065,0.0002456358,0.001606336,0.004125387,0.002993028,0.0008162432,0.423649,0.001631601,0.0008206376,0.01211648],"study_design_scores_gemma":[0.005895043,0.001067124,0.9050894,0.001371084,0.0003460943,0.008705931,0.000931969,0.002198932,0.06952777,0.003642243,0.0009032952,0.0003210991],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9900297,0.003752631,0.0006147032,0.00497129,0.0003557559,0.0001288601,0.00001390409,0.000007925531,0.0001252106],"genre_scores_gemma":[0.997443,0.0009325048,0.0006262889,0.0004581625,0.0003826648,0.000007308071,0.00009047344,0.00001328498,0.00004636363],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3568829,"threshold_uncertainty_score":0.5697648,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008652995348905573,"score_gpt":0.2708180835263558,"score_spread":0.2621650881774503,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}