{"id":"W3128859043","doi":"10.1097/qad.0000000000002829","title":"Rectal microbiota diversity in Kenyan MSM is inversely associated with frequency of receptive anal sex, independent of HIV status","year":2021,"lang":"en","type":"article","venue":"AIDS","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"","keywords":"Biology; Roseburia; Men who have sex with men; Prevotella; Demography; Immunology; Bacteroides; Human immunodeficiency virus (HIV); Syphilis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000316519,0.0002522279,0.0002372167,0.0004706604,0.0005161456,0.0004099327,0.0001476607,0.0002922606,0.002673404],"category_scores_gemma":[0.001376898,0.0002993274,0.0001556239,0.0004737538,0.0002243958,0.000277829,0.0003217174,0.0002034615,0.0002266333],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001525266,"about_ca_system_score_gemma":0.0001684376,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003329424,"about_ca_topic_score_gemma":0.006664488,"domain_scores_codex":[0.9998398,0.00004457492,0.00001540944,0.00003848451,0.00002910781,0.00003264973],"domain_scores_gemma":[0.9995608,0.0000626137,0.0002467595,0.00001896665,0.00003704919,0.00007382748],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000191629,0.00001903306,0.9961921,0.00002634319,0.00003518251,0.00004440446,0.0001236241,0.00001633293,0.001459528,0.000007512322,0.00004615744,0.001838134],"study_design_scores_gemma":[0.00000268558,0.00008261207,0.9993386,0.00001104621,0.00001497608,0.0001926738,0.0001279062,0.00007447858,0.00007019813,0.000006517828,0.00007658555,0.000001647776],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992576,0.0003193641,0.0000379781,0.00001356489,0.000001814398,0.000006443866,0.0001281752,0.000002085022,0.000233054],"genre_scores_gemma":[0.9995541,0.0001108519,0.0001090663,0.00000801245,0.000002461303,0.000005814707,0.00008552092,8.160619e-7,0.0001233272],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003329424,"threshold_uncertainty_score":0.008943498,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02538316811695406,"score_gpt":0.2620726972359407,"score_spread":0.2366895291189867,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}