{"id":"W3129565192","doi":"10.1101/2021.02.17.431678","title":"A draft genome of <i>Alliaria petiolata</i> (garlic mustard) as a model system for invasion genetics","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Sequence assembly; Genetics; Evolutionary biology; Gene; Whole genome sequencing; Genome size; Transcriptome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003852957,0.0005831715,0.0004808829,0.0005661929,0.0005244831,0.0009987125,0.0005528034,0.0005302386,0.001624208],"category_scores_gemma":[0.0006396448,0.0003469249,0.0006012113,0.0007405349,0.0001883776,0.0004344654,0.000491507,0.001033488,0.0009852359],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005236829,"about_ca_system_score_gemma":0.0006589458,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007104066,"about_ca_topic_score_gemma":0.008288337,"domain_scores_codex":[0.9998351,0.00002074772,0.00001376198,0.00007772011,0.00003352875,0.00001911869],"domain_scores_gemma":[0.9996058,0.00008606413,0.00007521581,0.0000633435,0.00008357675,0.00008605149],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002708411,0.00003367201,0.001839989,0.0002387629,0.00005115722,0.0003521674,0.0002213946,0.001245438,0.9865866,0.000402319,0.001176146,0.007581544],"study_design_scores_gemma":[0.0003870786,0.001222298,0.1748368,0.0003602286,0.0008516497,0.002764246,0.001114928,0.03515626,0.5392596,0.00229062,0.2415256,0.0002306879],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8298332,0.002593278,0.08564321,0.00093339,0.0002930489,0.0004853649,0.07080609,0.004591293,0.004821174],"genre_scores_gemma":[0.5650516,0.001779445,0.1715211,0.0002792566,0.00006167097,0.0003883163,0.2504567,0.001488285,0.00897363],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007104066,"threshold_uncertainty_score":0.01412547,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01477798045136676,"score_gpt":0.2134667280320922,"score_spread":0.1986887475807255,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}