{"id":"W3129796059","doi":"10.1101/2021.02.16.431540","title":"Shades of grey: Coat-colour dependent effect of urbanization on the bacterial microbiome of a wild mammal","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; University of Waterloo; University of Windsor; University of Guelph","keywords":"Wildlife; Urbanization; Microbiome; Biology; Ecology; Habitat; Generalist and specialist species; Sciurus; Geography; Phylogenetic tree; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002446292,0.0001964402,0.0002073354,0.0002805157,0.0003114431,0.0004701875,0.0001262045,0.000231225,0.001999381],"category_scores_gemma":[0.0005792215,0.0001398725,0.0002600748,0.00020188,0.000565959,0.0002168139,0.0004688847,0.0004387634,0.0001802829],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002565538,"about_ca_system_score_gemma":0.0001447893,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003427567,"about_ca_topic_score_gemma":0.01025924,"domain_scores_codex":[0.9997178,0.00007763054,0.00001063909,0.0001013011,0.00004643066,0.00004618115],"domain_scores_gemma":[0.9993101,0.0001259587,0.0002431949,0.00005406751,0.00007459857,0.0001921521],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002386702,0.0002182491,0.7210938,0.00007872315,0.0002677722,0.0002121501,0.0007058805,0.0002334337,0.2686687,0.0001069234,0.0003773468,0.005650219],"study_design_scores_gemma":[0.000001720781,0.0001703214,0.9983913,0.000002222257,0.0000163179,0.00004073152,0.0001771708,0.00008595645,0.0009931491,0.00001725153,0.0001004048,0.000003356068],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995605,0.00005172083,0.00007334536,0.00001645706,0.000003541536,0.000002154256,0.0001219353,0.000003200872,0.0001670912],"genre_scores_gemma":[0.9995474,0.00001870918,0.0001371586,0.00002898398,0.000002876762,0.000004199491,0.000104281,0.000003554889,0.0001528808],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003427567,"threshold_uncertainty_score":0.006815255,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007498173490170654,"score_gpt":0.2130052505978759,"score_spread":0.2055070771077052,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}