{"id":"W3130411417","doi":"10.3389/fmicb.2021.635881","title":"Organic Waste Substrates Induce Important Shifts in Gut Microbiota of Black Soldier Fly (Hermetia illucens L.): Coexistence of Conserved, Variable, and Potential Pathogenic Microbes","year":2021,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Insect Utilization and Effects","field":"Agricultural and Biological Sciences","cited_by":107,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Australian Centre for International Agricultural Research; Direktion für Entwicklung und Zusammenarbeit; Foreign, Commonwealth and Development Office; Deutscher Akademischer Austauschdienst; Government of the Republic of Kenya; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Styrelsen för Internationellt Utvecklingssamarbete; International Development Research Centre; Rockefeller Foundation","keywords":"Hermetia illucens; Biology; Firmicutes; Microbiology; Gut flora; Bacterial phyla; Enterococcus faecium; Pathogenic bacteria; Manure; Bacteria; Zoology; Ecology; Larva; Genetics; 16S ribosomal RNA; Antibiotics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003756656,0.0002152582,0.0005545434,0.00006236984,0.00004688838,0.00001637624,0.000230054,0.0003331564,0.0002266461],"category_scores_gemma":[0.00009764446,0.0001220285,0.00007835418,0.0006791067,0.0003833971,0.00005885674,0.000136998,0.000196776,0.000002151247],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003265568,"about_ca_system_score_gemma":0.00007351435,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00017701,"about_ca_topic_score_gemma":0.001034479,"domain_scores_codex":[0.9980773,0.0003423653,0.000675562,0.0004545466,0.00004492009,0.0004053244],"domain_scores_gemma":[0.9993393,0.00009415953,0.0002685022,0.0001071964,0.0001366941,0.00005407785],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008493815,0.0001382875,0.0384161,0.00006248256,0.00003127952,0.00003723261,0.0002714498,0.00001773721,0.9602364,0.00003827806,0.000445689,0.0002201193],"study_design_scores_gemma":[0.001323576,0.0003151113,0.1266767,0.0002276454,0.00004870397,0.0001432487,0.003018368,0.0002537312,0.8665605,0.0003620866,0.0005832581,0.0004870532],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968994,0.002032573,0.00002012721,0.0001261148,0.0004103359,0.000228044,0.0002281976,0.00001007441,0.00004508604],"genre_scores_gemma":[0.9975698,0.0005896052,0.001317583,0.0001584229,0.00002771041,0.000003281249,0.0002618479,0.00000321777,0.00006851797],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09367593,"threshold_uncertainty_score":0.4976179,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007717995221664301,"score_gpt":0.1878961283871993,"score_spread":0.180178133165535,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}