{"id":"W3131012693","doi":"10.1016/j.ygeno.2021.02.001","title":"Genetic predictors of gene expression associated with psychiatric comorbidity in patients with inflammatory bowel disease – A pilot study","year":2021,"lang":"en","type":"article","venue":"Genomics","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"Public Health Ontario; University of Toronto; University of Manitoba","funders":"National Institutes of Health; Mitacs; University of Manitoba; Health Sciences Centre Foundation","keywords":"Biology; Gene; Transcriptome; Gene expression; Candidate gene; Inflammatory bowel disease; Genetics; Genome-wide association study; Genetic association; Disease; Medicine; Single-nucleotide polymorphism; Pathology; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001176009,0.0002247636,0.0001820464,0.00007063551,0.00006250539,0.00001554775,0.0001914127,0.00006066332,0.00001040533],"category_scores_gemma":[0.00007299016,0.0002017584,0.00004163677,0.0001337473,0.0000720383,0.000006888844,0.0001166111,0.0001004585,0.000002067298],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006486919,"about_ca_system_score_gemma":0.0005357658,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004699354,"about_ca_topic_score_gemma":0.0002129912,"domain_scores_codex":[0.998482,0.0001888175,0.0003389528,0.0004506713,0.0002734282,0.000266104],"domain_scores_gemma":[0.9987307,0.000008550786,0.0002189538,0.0006087738,0.0002413214,0.0001917492],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002436063,0.002001935,0.9832895,0.00003560239,0.0001008628,0.0001333048,0.00008640016,0.002073812,0.009767324,7.746424e-7,0.00005979777,0.00001464729],"study_design_scores_gemma":[0.004369799,0.001062782,0.991987,0.00002521704,0.00009320988,6.145394e-7,0.00006642038,0.00002856957,0.002081682,0.000005505124,0.0000274256,0.0002517182],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988275,0.0001452648,0.00005763779,0.000004198661,0.0001017172,0.000667894,0.0001523942,0.00001347635,0.00002991129],"genre_scores_gemma":[0.9990737,0.00001992599,0.0003728626,0.00003830994,0.0000703972,0.00004904599,0.0002986347,0.00004814863,0.0000289274],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008697581,"threshold_uncertainty_score":0.8227468,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005443570749836832,"score_gpt":0.1944365397779366,"score_spread":0.1889929690280998,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}