{"id":"W3131029063","doi":"10.1128/aem.03027-20","title":"Transcriptome Analysis of Listeria monocytogenes Exposed to Beef Fat Reveals Antimicrobial and Pathogenicity Attenuation Mechanisms","year":2021,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Kane Biotech (Canada); Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Government of Canada","keywords":"Listeria monocytogenes; Biology; Pathogen; Microbiology; Antimicrobial; Pathogenicity; Transcriptome; Listeria; Foodborne pathogen; Strain (injury); Food microbiology; Bacteria; Food science; Biotechnology; Gene; Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001589722,0.000237536,0.000380149,0.000243476,0.0002694645,0.0004248595,0.00009790987,0.0002343504,0.000643233],"category_scores_gemma":[0.0001719754,0.0001380263,0.0004140942,0.0003900517,0.0001681925,0.00021852,0.000300653,0.000403013,0.0001976498],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002007875,"about_ca_system_score_gemma":0.0002555582,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001378022,"about_ca_topic_score_gemma":0.001410689,"domain_scores_codex":[0.9998413,0.00001483056,0.000008584358,0.00005669996,0.00003384069,0.00004462118],"domain_scores_gemma":[0.9999068,0.00001798357,0.00002422639,0.000005533277,0.00003059814,0.00001481041],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002735649,0.00002073987,0.002925943,0.00008433947,0.00001300147,0.00004637434,0.0001215675,0.0000712171,0.9943877,0.00002989619,0.00005780078,0.001967843],"study_design_scores_gemma":[0.00002860165,0.001268659,0.6523159,0.0001147788,0.0002426223,0.0005744062,0.00194835,0.00444793,0.3318879,0.0003157919,0.006798621,0.00005650757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944384,0.00141106,0.001200431,0.00009603157,0.0000296066,0.00001126215,0.002072571,0.00002349664,0.0007171555],"genre_scores_gemma":[0.990056,0.001073958,0.001826967,0.0001823922,0.00001562326,0.00004120237,0.004576272,0.00002388452,0.002203692],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001378022,"threshold_uncertainty_score":0.002739966,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0238628579073617,"score_gpt":0.2440611796784016,"score_spread":0.2201983217710399,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}