{"id":"W3132228874","doi":"10.1128/mbio.03579-20","title":"A Heterogeneously Expressed Gene Family Modulates the Biofilm Architecture and Hypoxic Growth of <i>Aspergillus fumigatus</i>","year":2021,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Dartmouth College; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; Burroughs Wellcome Fund; Cystic Fibrosis Foundation; National Institutes of Health; National Science Foundation","keywords":"Biofilm; Aspergillus fumigatus; Microbiology; Function (biology); Biology; Gene; Bacteria; Computational biology; Chemistry; Cell biology; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001322776,0.0003505039,0.0002076481,0.0002185498,0.0001564918,0.0002846797,0.0001676444,0.000198972,0.0006409535],"category_scores_gemma":[0.000197728,0.0001102746,0.0002187126,0.0001399387,0.0002792511,0.0001508758,0.0002679908,0.0005027899,0.0004382156],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000369596,"about_ca_system_score_gemma":0.00018,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001336066,"about_ca_topic_score_gemma":0.001221149,"domain_scores_codex":[0.9998308,0.00002319942,0.00001072767,0.00004449612,0.00003922097,0.00005150149],"domain_scores_gemma":[0.9998404,0.0000355844,0.00005000791,0.00001999432,0.0000171074,0.00003682882],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002466494,0.000008545602,0.0001392389,0.000004775976,0.00000103268,0.0000149729,0.000007793678,0.00001380462,0.9993802,0.00004448157,0.00002743019,0.0003330006],"study_design_scores_gemma":[0.000008777071,0.0001807229,0.02351105,0.000008546925,0.00001989026,0.0004270926,0.0001608527,0.001322427,0.9717452,0.0001072075,0.002498641,0.000009433654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946645,0.0008111756,0.002718316,0.0001691881,0.00003004241,0.00001230025,0.0002626697,0.00007090928,0.001260885],"genre_scores_gemma":[0.9951001,0.0004598808,0.001797956,0.0001060911,0.00001266191,0.00002023713,0.0006189727,0.00004593765,0.001838055],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001336066,"threshold_uncertainty_score":0.002681613,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00706996361207158,"score_gpt":0.1941656754256376,"score_spread":0.1870957118135661,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}