{"id":"W3132659034","doi":"10.3390/microorganisms9020449","title":"A Narrative Review of the Molecular Epidemiology and Laboratory Surveillance of Vaccine Preventable Bacterial Meningitis Agents: Streptococcus pneumoniae, Neisseria meningitidis, Haemophilus influenzae and Streptococcus agalactiae","year":2021,"lang":"en","type":"review","venue":"Microorganisms","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Neisseria meningitidis; Streptococcus pneumoniae; Microbiology; Streptococcus agalactiae; Meningitis; Serotype; Haemophilus influenzae; Vaccination; Meningococcal vaccine; Virology; Biology; Conjugate vaccine; Herd immunity; Immunology; Medicine; Streptococcus; Bacteria; Antibiotics; Pediatrics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008888213,0.0007211932,0.004378197,0.0001642362,0.0001727551,0.00001951458,0.0002559988,0.0004814655,0.0003065365],"category_scores_gemma":[0.001153399,0.0005169417,0.0005268842,0.0008232804,0.0002936162,0.00009637792,0.0003903827,0.0006458464,0.000003017106],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001397706,"about_ca_system_score_gemma":0.0009809597,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003868742,"about_ca_topic_score_gemma":0.00002514573,"domain_scores_codex":[0.9950938,0.001568297,0.001867799,0.000817174,0.0001909207,0.0004620096],"domain_scores_gemma":[0.9961845,0.0003950836,0.00178731,0.0009637574,0.0004351034,0.0002342958],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006843731,0.001005365,0.04465962,0.4252136,0.007489211,0.0003482913,0.001757132,0.000002274582,0.4223962,0.0003051153,0.009969855,0.0867849],"study_design_scores_gemma":[0.001365754,0.0005314094,0.007726136,0.1161016,0.002714557,0.0005668815,0.0001516832,4.301425e-7,0.006552848,0.00001788185,0.8635808,0.0006899399],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0537079,0.9423356,0.000006249214,0.0003169156,0.0003378556,0.002678405,0.0005293562,0.00003254676,0.00005515142],"genre_scores_gemma":[0.002014987,0.9968336,0.00006870517,0.0003903945,0.0001048062,0.0002113206,0.0001988067,0.00009988347,0.0000775614],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.853611,"threshold_uncertainty_score":0.9997282,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02252043309164381,"score_gpt":0.3341876394585238,"score_spread":0.31166720636688,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}