{"id":"W3132756055","doi":"10.1128/msphere.01250-20","title":"Aspergillus fumigatus Strain-Specific Conidia Lung Persistence Causes an Allergic Broncho-Pulmonary Aspergillosis-Like Disease Phenotype","year":2021,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Dartmouth College; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; Memorial Sloan-Kettering Cancer Center; Cystic Fibrosis Foundation; National Cancer Institute; National Institutes of Health; National Science Foundation","keywords":"Allergic bronchopulmonary aspergillosis; Aspergillus fumigatus; Cystic fibrosis; Aspergillus; Aspergillosis; Pulmonary aspergillosis; Lung; Immunology; Medicine; Disease; Phenotype; Fungus; Microbiology; Lung disease; Biology; Pathology; Immunoglobulin E; Antibody; Internal medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001807994,0.000433231,0.0005972015,0.00003753789,0.0003288465,0.00009101346,0.0002493386,0.0002017835,0.007130248],"category_scores_gemma":[0.00012405,0.0004043419,0.000372337,0.0003899822,0.0003292404,0.0003070483,0.0001070117,0.0004651978,0.0002496894],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002938375,"about_ca_system_score_gemma":0.0006802835,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004239398,"about_ca_topic_score_gemma":0.0004045921,"domain_scores_codex":[0.9968354,0.0001724954,0.0004727958,0.00110284,0.0007079466,0.000708547],"domain_scores_gemma":[0.9971223,0.00009380918,0.00009881031,0.001314786,0.0004150389,0.0009552193],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.004090518,0.003792433,0.7853751,0.00172242,0.0007651571,0.01803816,0.001998486,0.0001784039,0.1360471,0.003687853,0.01619309,0.02811129],"study_design_scores_gemma":[0.001335662,0.0002224091,0.9476689,0.0004228808,0.0003040345,0.00009033221,0.004758972,0.0005752651,0.0008656843,0.0002144528,0.04284247,0.0006989713],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.942489,0.03592002,0.00005987531,0.0008999349,0.0005201797,0.0004144372,0.0001692373,0.0002156004,0.01931166],"genre_scores_gemma":[0.9847337,0.002104663,0.0005325505,0.00113708,0.0004093898,0.00002296012,0.0003207758,0.00007458917,0.01066426],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1622937,"threshold_uncertainty_score":0.9998409,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03244788078379739,"score_gpt":0.2687327372105947,"score_spread":0.2362848564267973,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}