{"id":"W3133776405","doi":"10.1038/s41396-021-00939-5","title":"Competition between strains of <i>Borrelia afzelii</i> in the host tissues and consequences for transmission to ticks","year":2021,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Université de Neuchâtel; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Biology; Borrelia afzelii; Host (biology); Transmission (telecommunications); Competition (biology); Borrelia; Zoology; Ecology; Virology; Microbiology; Borrelia burgdorferi; Immunology; Antibody","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004158526,0.00007734769,0.000161453,0.00004145816,0.0001912902,0.00002621802,0.0001392054,0.00006317765,0.0001571943],"category_scores_gemma":[0.00008105255,0.0000441944,0.00005504879,0.00008904847,0.000188687,0.00004303473,0.00001517523,0.0002064736,0.000008086558],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001283286,"about_ca_system_score_gemma":0.00009527508,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004560218,"about_ca_topic_score_gemma":0.00005650335,"domain_scores_codex":[0.999209,0.0003032229,0.0002150589,0.00008807924,0.00003640657,0.000148252],"domain_scores_gemma":[0.9993799,0.0003472361,0.00007935998,0.00009501469,0.00007856086,0.00001986661],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001609173,0.0002305979,0.0171356,0.00005914964,0.0002458338,0.00002433493,0.008251608,0.00004215803,0.9486594,0.003194875,0.004636342,0.0173592],"study_design_scores_gemma":[0.004293092,0.001758858,0.5687016,0.0006723538,0.0005527895,0.002372488,0.01034008,0.000007324734,0.3198619,0.01438324,0.07662839,0.0004279693],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9855174,0.003618868,0.001861008,0.008284365,0.000170262,0.0002067274,0.0000727057,0.000008028854,0.0002606191],"genre_scores_gemma":[0.9990774,0.0002735009,0.00008475049,0.0003836901,0.00006637575,0.000006294858,0.00001361386,0.000005367849,0.00008894198],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6287975,"threshold_uncertainty_score":0.1802195,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02022479267919982,"score_gpt":0.280127883266709,"score_spread":0.2599030905875092,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}