{"id":"W3135048480","doi":"10.1002/pro.4057","title":"Structural and functional study of <i>Legionella pneumophila</i> effector RavA","year":2021,"lang":"en","type":"article","venue":"Protein Science","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Arbutus Biopharma (Canada); University of Saskatchewan","funders":"Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Research Council Canada; Canada Foundation for Innovation; University of Saskatchewan; Canadian Light Source","keywords":"Legionella pneumophila; Effector; Biology; Phagosome; Legionella; Cell biology; Microbiology; Intracellular parasite; Secretion; Vacuole; Intracellular; Bacteria; Biochemistry; Genetics; Cytoplasm","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001183816,0.000317851,0.0001731709,0.0001217745,0.0001669413,0.000185042,0.0002692375,0.0002796748,0.0009569141],"category_scores_gemma":[0.0001502394,0.00008963368,0.0003492021,0.0001500128,0.0001450436,0.0002092181,0.0001660299,0.0003955929,0.0002585664],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003082837,"about_ca_system_score_gemma":0.0001524478,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001185687,"about_ca_topic_score_gemma":0.0006352233,"domain_scores_codex":[0.9999458,0.00001014814,0.000004246379,0.00001404098,0.00001516243,0.00001060278],"domain_scores_gemma":[0.9999263,0.00001357995,0.0000179437,0.00000572539,0.00001594111,0.00002040784],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002268043,0.00005917547,0.00110002,0.00008375807,0.00001187019,0.0003175412,0.00004071231,0.0005561673,0.9960132,0.0002279748,0.0001160101,0.001246806],"study_design_scores_gemma":[0.0000610202,0.0008568447,0.03700791,0.00002863668,0.00007341254,0.001737698,0.000258903,0.01424048,0.9338742,0.0002860809,0.01154203,0.00003280677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972192,0.0007223737,0.0008249047,0.00009338106,0.00001470705,0.00001165515,0.0003358808,0.00003268263,0.0007451043],"genre_scores_gemma":[0.9952931,0.0003026328,0.001618358,0.00005352607,0.000005197975,0.000008524805,0.00161905,0.000009688764,0.001089882],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001185687,"threshold_uncertainty_score":0.003201246,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01845033286079431,"score_gpt":0.2737956395341677,"score_spread":0.2553453066733734,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}