{"id":"W3135700745","doi":"10.3390/antibiotics10030237","title":"Antibiotic Resistance in Shiga Toxigenic Escherichia coli Isolates from Surface Waters and Sediments in a Mixed Use Urban Agricultural Landscape","year":2021,"lang":"en","type":"article","venue":"Antibiotics","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Agriculture and Agri-Food Canada; Canadian Food Inspection Agency; University of British Columbia","funders":"Agriculture and Agri-Food Canada; Health Canada; Public Health Agency; Public Health Agency of Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Food Inspection Agency","keywords":"Microbiology; Cefoxitin; Biology; Amikacin; Meropenem; Ertapenem; Nalidixic acid; Kanamycin; Ampicillin; Antibiotic resistance; Cefotaxime; Imipenem; Sulfamethoxazole; Antibiotics; Genetics; Bacteria; Staphylococcus aureus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001132371,0.0003111656,0.0002736757,0.000848004,0.0007061858,0.0009264343,0.0001750465,0.0002231507,0.0003550571],"category_scores_gemma":[0.0003282652,0.0001857558,0.0001466697,0.001246983,0.0003469311,0.0001083397,0.0002955815,0.0001568683,0.00008221765],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001229022,"about_ca_system_score_gemma":0.001202308,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.3461283,"about_ca_topic_score_gemma":0.4869245,"domain_scores_codex":[0.9997174,0.00002843558,0.00001973643,0.00006524943,0.00009296464,0.00007608697],"domain_scores_gemma":[0.9997743,0.00002431087,0.00006012163,0.000009123901,0.00007588947,0.00005629422],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003685215,0.0001004797,0.8841869,0.00007451593,0.00007803985,0.000638187,0.001223731,0.0008904457,0.1061346,0.00002873958,0.0001175073,0.006158283],"study_design_scores_gemma":[0.000006781162,0.00007767663,0.9947016,0.000007488345,0.00002828854,0.0001818147,0.001248397,0.0005895064,0.002893692,0.000008430042,0.0002509595,0.00000542893],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997848,0.00002064501,0.00002031486,0.00000346222,2.1177e-7,0.000002593634,0.00007395031,0.000001180356,0.00009288485],"genre_scores_gemma":[0.9993055,0.00005544648,0.0001078094,0.000009091036,4.753642e-7,0.000003184055,0.0003865384,0.000001223012,0.0001306887],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3461283,"threshold_uncertainty_score":0.6882272,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008427226048049656,"score_gpt":0.2159790269240175,"score_spread":0.2075518008759679,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}