{"id":"W3135774599","doi":"10.1128/mra.01489-20","title":"Draft Genome Sequences of Seven Vibrio cholerae Isolates from Adult Patients in Qatar","year":2021,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Qatar National Research Fund; Qatar Foundation","keywords":"Vibrio cholerae; Biology; Genome; Virulence; Whole genome sequencing; Pandemic; Multilocus sequence typing; Microbiology; Pathogenicity island; Cholera; Pathogenicity; Gene; Genetics; Coronavirus disease 2019 (COVID-19); Genotype; Bacteria; Medicine; Infectious disease (medical specialty)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005367346,0.0006578073,0.0006176573,0.001649219,0.0008130814,0.0007799612,0.0004773422,0.0006215912,0.005799095],"category_scores_gemma":[0.001606804,0.0003734419,0.000842288,0.002673811,0.0002512884,0.0003429524,0.0005833594,0.0008920672,0.002206005],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006175737,"about_ca_system_score_gemma":0.001846426,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01322214,"about_ca_topic_score_gemma":0.01671102,"domain_scores_codex":[0.9997199,0.00003513961,0.0000426554,0.0000759742,0.00006081113,0.00006553908],"domain_scores_gemma":[0.999274,0.0001679738,0.0001572222,0.0000510092,0.0002706257,0.00007917597],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00519155,0.0003265779,0.06938595,0.005215068,0.0006440751,0.005013157,0.00545653,0.006913486,0.7150435,0.001412558,0.071008,0.1143895],"study_design_scores_gemma":[0.0006323967,0.001364113,0.6666424,0.000907834,0.001129741,0.003648548,0.004218403,0.00769499,0.04851941,0.002095108,0.2629693,0.0001777304],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.3644571,0.002727205,0.009247174,0.001452287,0.0002880984,0.0002963802,0.6183935,0.0009551188,0.002183272],"genre_scores_gemma":[0.1200629,0.001376873,0.02390487,0.0003461279,0.00006355629,0.000215691,0.851633,0.0001701859,0.002226789],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.01322214,"threshold_uncertainty_score":0.02629042,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007117216539770329,"score_gpt":0.2322094229285962,"score_spread":0.2250922063888259,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}