{"id":"W3135884525","doi":"10.1093/jcag/gwab002.037","title":"A39 CULTURE-ENRICHED METAGENOMICS REVEALED MICROBIAL ENGRAFTMENT FOLLOWING FMT IN PATIENTS WITH ULCERATIVE COLITIS","year":2021,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Microscopic Colitis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Metagenomics; Ulcerative colitis; Microbiome; Fecal bacteriotherapy; Medicine; Clostridium difficile; Microbiology; Immunology; Biology; Internal medicine; Bioinformatics; Genetics; Gene; Antibiotics; Disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004990321,0.0001094709,0.000511064,0.0001612745,0.00006244619,0.00001662034,0.000116777,0.0001045139,0.00005877669],"category_scores_gemma":[0.0004192553,0.0000852499,0.0002002006,0.0001553887,0.00002641876,0.00005603027,0.00002538403,0.000339757,0.000001042257],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003383995,"about_ca_system_score_gemma":0.0009474133,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002008418,"about_ca_topic_score_gemma":0.5414758,"domain_scores_codex":[0.9983746,0.0003998493,0.0005352994,0.000114119,0.0002612119,0.0003148713],"domain_scores_gemma":[0.9983309,0.00003908355,0.0007447643,0.0001398923,0.0005693128,0.0001760494],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005361448,0.0001066356,0.9942533,0.00001236702,0.000498953,0.00006663206,0.0007113062,0.00001489333,0.000881165,0.0000170867,0.002870424,0.00003112386],"study_design_scores_gemma":[0.007541179,0.0007639946,0.9894159,0.00009896207,0.0002180312,0.00004795456,0.00009734589,0.000002031308,0.0002328603,0.00002254907,0.00151832,0.00004085396],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937913,0.00001637804,0.00001464305,0.005298815,0.0004428931,0.0002479242,0.00005068235,0.000001384389,0.0001360057],"genre_scores_gemma":[0.9959669,0.000009319662,0.0009353306,0.002069407,0.00007066683,0.00000233264,0.00001687466,0.00001128218,0.0009178857],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5394673,"threshold_uncertainty_score":0.884903,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004660949596693644,"score_gpt":0.2135770412889236,"score_spread":0.20891609169223,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}