{"id":"W3135884525","doi":"10.1093/jcag/gwab002.037","title":"A39 CULTURE-ENRICHED METAGENOMICS REVEALED MICROBIAL ENGRAFTMENT FOLLOWING FMT IN PATIENTS WITH ULCERATIVE COLITIS","year":2021,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Microscopic Colitis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Metagenomics; Ulcerative colitis; Microbiome; Fecal bacteriotherapy; Medicine; Clostridium difficile; Microbiology; Immunology; Biology; Internal medicine; Bioinformatics; Genetics; Gene; Antibiotics; Disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003382297,0.0002485965,0.0005969859,0.0004794247,0.0003140066,0.001071013,0.0002128153,0.000514711,0.001843738],"category_scores_gemma":[0.0008524432,0.0001571338,0.0004500783,0.0005255849,0.0001864647,0.0002679154,0.0003478034,0.0006035132,0.0003387631],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004450023,"about_ca_system_score_gemma":0.0003358059,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003506713,"about_ca_topic_score_gemma":0.004442907,"domain_scores_codex":[0.9996637,0.00006080034,0.00002079836,0.00009373629,0.00007454133,0.00008630749],"domain_scores_gemma":[0.999769,0.00005615859,0.00005830365,0.00002309622,0.00005010884,0.00004335694],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.009767281,0.0003752236,0.5361119,0.0005855686,0.0009075616,0.002735011,0.001089019,0.0009832963,0.347461,0.0004005228,0.003527277,0.09605623],"study_design_scores_gemma":[0.00008282615,0.001148978,0.9587729,0.0001726211,0.0007424378,0.001993943,0.001327774,0.001450681,0.02694695,0.0004689645,0.006854337,0.00003761087],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934662,0.002635587,0.0005965106,0.0003169712,0.00006484587,0.00002736592,0.001886886,0.00002549153,0.0009801815],"genre_scores_gemma":[0.9965519,0.0005659888,0.0006645826,0.000206763,0.00003391392,0.00001970802,0.001223598,0.00001560542,0.0007180026],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003506713,"threshold_uncertainty_score":0.006972611,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004660949596693644,"score_gpt":0.2135770412889236,"score_spread":0.20891609169223,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}