{"id":"W3136020393","doi":"10.3390/v13030493","title":"Resurrection of a Viral Internal Ribosome Entry Site from a 700 Year Old Ancient Northwest Territories Cripavirus","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Internal ribosome entry site; Biology; Ribosome; Eukaryotic translation; Translation (biology); Start codon; Genetics; Shine-Dalgarno sequence; Footprinting; RNA; Virology; Messenger RNA; DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001844814,0.0001737544,0.0001595198,0.0001671265,0.0002278892,0.0003135659,0.000152127,0.0002040887,0.0004043115],"category_scores_gemma":[0.0002097193,0.0001043492,0.0001864045,0.00009501731,0.0002704529,0.0001752245,0.0001778324,0.0007457962,0.0002527035],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005085919,"about_ca_system_score_gemma":0.0002482654,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00186304,"about_ca_topic_score_gemma":0.003623541,"domain_scores_codex":[0.9999266,0.00001246136,0.00000344476,0.00002405584,0.00001929213,0.0000141261],"domain_scores_gemma":[0.9999031,0.0000237923,0.0000183805,0.00001219707,0.00001636368,0.0000261978],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003517057,0.000008072754,0.0007925592,0.00001622259,0.000003062115,0.00009604271,0.00006713423,0.00003963519,0.9972826,0.0002467342,0.00001735503,0.001395397],"study_design_scores_gemma":[0.00001036034,0.0003127905,0.04832628,0.00002156843,0.00002587165,0.001381579,0.000320873,0.001754863,0.9383045,0.0002019993,0.009321814,0.00001742615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954258,0.0003515366,0.002818786,0.00003104422,0.00001435973,0.00000861085,0.00008309227,0.00001827164,0.001248508],"genre_scores_gemma":[0.9889395,0.0003835624,0.006981904,0.00007873886,0.00001104083,0.00001094591,0.0007030871,0.00002623699,0.002864981],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9981369,"threshold_uncertainty_score":0.003704429,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03385747658455818,"score_gpt":0.2680799648871917,"score_spread":0.2342224883026335,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}