{"id":"W3136030896","doi":"10.1016/s2666-5247(21)00028-8","title":"Leishmania donovani hybridisation and introgression in nature: a comparative genomic investigation","year":2021,"lang":"en","type":"article","venue":"The Lancet Microbe","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Compute Canada; McGill University","keywords":"Biology; Leishmania tropica; Cutaneous leishmaniasis; Leishmania donovani; Leishmaniasis; Whole genome sequencing; Visceral leishmaniasis; Genetics; Leishmania; Virology; Genome; Gene; Parasite hosting","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003268493,0.0001776215,0.0002084557,0.001529472,0.0004270603,0.0004511592,0.0002630223,0.0004133736,0.002023952],"category_scores_gemma":[0.0002111275,0.0001104063,0.0003936535,0.001656632,0.0004156275,0.0001981375,0.0003033393,0.0004328439,0.0004806199],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002905229,"about_ca_system_score_gemma":0.0001751532,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008582061,"about_ca_topic_score_gemma":0.00145226,"domain_scores_codex":[0.9998007,0.00002341791,0.000009024056,0.00008518131,0.00003535517,0.0000461653],"domain_scores_gemma":[0.9998068,0.00005860925,0.00005248961,0.00001753988,0.00002704496,0.0000375811],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005368736,0.0001278665,0.0365549,0.0003846795,0.0001355814,0.001033382,0.001278235,0.0002042696,0.9349329,0.001474272,0.00024124,0.02309585],"study_design_scores_gemma":[0.00005836829,0.0009384397,0.9066498,0.00009593313,0.0003162807,0.006416167,0.002377446,0.001233592,0.04713231,0.0008958353,0.03384016,0.00004567659],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9874367,0.002395774,0.003582004,0.000087841,0.00001787801,0.00006048115,0.001491135,0.00003628995,0.004891922],"genre_scores_gemma":[0.98704,0.001347605,0.00613295,0.0001025128,0.00001573623,0.00004827535,0.004100291,0.0000174544,0.001195133],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002023952,"threshold_uncertainty_score":0.006770849,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05366492805601864,"score_gpt":0.3361085997737536,"score_spread":0.282443671717735,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}