{"id":"W3136666214","doi":"10.3389/fcimb.2021.622195","title":"Genetic Characterization of AmpC and Extended-Spectrum Beta-Lactamase Phenotypes in Escherichia coli and Salmonella From Alberta Broiler Chickens","year":2021,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Agriculture Food and Rural Development; University of Saskatchewan; University of Calgary","funders":"Alberta Agriculture and Forestry; Public Health Agency of Canada","keywords":"Biology; Salmonella; Integron; Microbiology; Escherichia coli; Salmonella enterica; Gene cassette; Plasmid; Serotype; Beta-lactamase; Enterobacteriaceae; Gene; Virology; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001518468,0.0002963908,0.0002097284,0.0007447387,0.0002657951,0.0003476741,0.0002008528,0.0002342843,0.0002828424],"category_scores_gemma":[0.000338021,0.0002116431,0.0002373758,0.0004622664,0.0002542567,0.00009888843,0.0002429098,0.0002742972,0.0001216243],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000596187,"about_ca_system_score_gemma":0.000666091,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.05843722,"about_ca_topic_score_gemma":0.09884004,"domain_scores_codex":[0.9997948,0.00001220891,0.00001613022,0.00003599875,0.00009561538,0.00004530606],"domain_scores_gemma":[0.9996738,0.00004448302,0.00007112198,0.00002126829,0.0001116536,0.00007760455],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000350686,0.0001100805,0.1211233,0.00004712694,0.00002452139,0.0007650707,0.000442284,0.0001635115,0.8728996,0.00003818335,0.0000358608,0.003999705],"study_design_scores_gemma":[0.00001452201,0.000448428,0.9483224,0.000009075897,0.00003191664,0.001107204,0.0007160458,0.000311255,0.0483362,0.00001387358,0.0006799643,0.000009175789],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993708,0.00004611223,0.0001582525,0.000009254392,0.000001824976,0.0000106163,0.0001284717,0.000002312242,0.0002725185],"genre_scores_gemma":[0.9971524,0.0001266911,0.0006771988,0.0000246645,0.000002427663,0.00001094111,0.0009522296,0.000004173684,0.001049278],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9415628,"threshold_uncertainty_score":0.1161942,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003572472538839275,"score_gpt":0.18681480726194,"score_spread":0.1832423347231007,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}