{"id":"W3137641233","doi":"10.1128/mbio.00294-21","title":"Effect of HIV/HAART and Other Clinical Variables on the Oral Mycobiome Using Multivariate Analyses","year":2021,"lang":"en","type":"article","venue":"mBio","topic":"HIV/AIDS oral health manifestations","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institute of Dental and Craniofacial Research; National Institute of General Medical Sciences","keywords":"Internal transcribed spacer; Biology; Malassezia; Firmicutes; Microbiology; Bacteroidetes; Candida dubliniensis; Actinobacteria; Candida albicans; Ribosomal RNA; Corpus albicans; 16S ribosomal RNA; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00523914,0.001317119,0.001146971,0.001497158,0.0004853487,0.00182837,0.0005865034,0.0004600422,0.004239263],"category_scores_gemma":[0.008914694,0.0001957923,0.002396064,0.001494824,0.0005521139,0.000753621,0.001171132,0.001411415,0.000373584],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002998747,"about_ca_system_score_gemma":0.0007989709,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005619866,"about_ca_topic_score_gemma":0.004076384,"domain_scores_codex":[0.9955136,0.002368926,0.0002848672,0.000655069,0.0006186807,0.0005589633],"domain_scores_gemma":[0.9939448,0.004238499,0.0006270456,0.00052962,0.0002105373,0.0004494423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003049692,0.0002669632,0.9445429,0.0001872777,0.00605658,0.0004030627,0.0003536721,0.002251255,0.002876572,0.0005691378,0.001272131,0.03817066],"study_design_scores_gemma":[0.00004158781,0.001450432,0.9540567,0.00009246504,0.002139185,0.0004479424,0.0008108197,0.03569044,0.001266414,0.001029873,0.002906311,0.00006774803],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983135,0.002058377,0.009784016,0.0003439273,0.0001389004,0.0001138359,0.002030577,0.0001512053,0.002244274],"genre_scores_gemma":[0.9961463,0.0002657446,0.001983466,0.00003711479,0.00006620333,0.00005995982,0.0005723395,0.00004138524,0.0008273654],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005619866,"threshold_uncertainty_score":0.02770758,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1830862351266078,"score_gpt":0.4998497459715974,"score_spread":0.3167635108449897,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}