{"id":"W3137902539","doi":"10.1111/mmi.14718","title":"Competence pili in <i>Streptococcus pneumoniae</i> are highly dynamic structures that retract to promote DNA uptake","year":2021,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"National Institutes of Health; National Science Foundation","keywords":"Pilus; Biology; Streptococcus pneumoniae; Microbiology; DNA; Bacterial protein; Genetics; Gene; Bacteria; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001005807,0.0002761163,0.0005036824,0.0001944916,0.00008429369,0.00002212787,0.0001558569,0.0002909464,0.00009163859],"category_scores_gemma":[0.0001046745,0.0002479398,0.0001629422,0.0004511804,0.0001163777,0.00003241711,0.0001190686,0.0004886164,0.00009121952],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001427978,"about_ca_system_score_gemma":0.0001843616,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001022038,"about_ca_topic_score_gemma":0.0001810487,"domain_scores_codex":[0.9982898,0.0001498573,0.0003433309,0.0006379649,0.00008146681,0.0004975997],"domain_scores_gemma":[0.9990075,0.00002600773,0.0001035827,0.0005723952,0.0001196676,0.0001708587],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001346654,0.0001290839,0.01825231,0.0000466676,0.00005732042,0.002202106,0.00007847403,0.00004572922,0.9780998,0.00004558797,0.0001610806,0.0008683834],"study_design_scores_gemma":[0.001154661,0.0003776592,0.224141,0.0001976145,0.00007356915,0.00212869,0.0001107251,0.00001853278,0.6700519,0.0001045691,0.1012497,0.000391452],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937925,0.0005046278,0.0001756426,0.003981733,0.0004080247,0.0005642389,0.00007502745,0.00008569727,0.000412516],"genre_scores_gemma":[0.9943311,0.00003230259,0.0002805688,0.004915682,0.00002959148,0.00004539646,0.000116694,0.00003579518,0.000212874],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3080479,"threshold_uncertainty_score":0.9999973,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01012537261519324,"score_gpt":0.2587762938089938,"score_spread":0.2486509211938005,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}