{"id":"W3138087643","doi":"10.1371/journal.pbio.3001123","title":"Dynamics of the cell fate specifications during female gametophyte development in Arabidopsis","year":2021,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Precursory Research for Embryonic Science and Technology; Institute of Genetics; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Gametophyte; Biology; Ovule; Egg cell; Cell fate determination; Cell biology; Arabidopsis; Cell division; Arabidopsis thaliana; Transcriptome; Megaspore; Botany; Embryo; Cell; Genetics; Gene expression; Mutant; Gene; Transcription factor; Pollen","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008754744,0.000106785,0.0001642655,0.00003739884,0.00004293177,0.000002534223,0.0002203148,0.0001446618,0.00002059491],"category_scores_gemma":[0.0001299848,0.00008525684,0.00005319097,0.0001532803,0.0001233689,0.000001324078,0.0002243416,0.00009567643,0.000009086843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000342056,"about_ca_system_score_gemma":0.0001309699,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000535085,"about_ca_topic_score_gemma":0.0002589605,"domain_scores_codex":[0.9989602,0.0001356241,0.0002458066,0.0004177907,0.00003810498,0.0002024736],"domain_scores_gemma":[0.9992999,0.00001686333,0.0001050971,0.0004644921,0.00009038977,0.00002322246],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002649939,0.0001158264,0.1121206,0.00001814279,0.00003196936,0.000001636954,0.00003478332,0.00001355342,0.8871415,0.0003179954,0.000008542188,0.0001689432],"study_design_scores_gemma":[0.0001765929,0.00002513008,0.1745437,0.000006940688,0.000006557483,0.000009864662,0.00005018946,0.000007186427,0.82264,0.0001136671,0.002331888,0.000088234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975651,0.0005424555,0.00009668357,0.0002758384,0.0001366571,0.0001201374,0.00004269125,0.00000481519,0.001215642],"genre_scores_gemma":[0.9976972,0.0001396173,0.001032423,0.00004850905,0.00006888127,0.00002507798,0.0002029327,0.000009062755,0.0007762964],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06450146,"threshold_uncertainty_score":0.3476673,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02293975186380507,"score_gpt":0.2240694266765798,"score_spread":0.2011296748127747,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}