{"id":"W3140202536","doi":"10.7554/elife.59288","title":"Discovery and characterization of a novel family of prokaryotic nanocompartments involved in sulfur metabolism","year":2021,"lang":"en","type":"article","venue":"eLife","topic":"Nitrogen and Sulfur Effects on Brassica","field":"Biochemistry, Genetics and Molecular Biology","cited_by":85,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; U.S. Department of Energy; Howard Hughes Medical Institute; National Science Foundation","keywords":"Sulfur metabolism; Computational biology; Metabolism; Sulfur; Biology; Chemistry; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008561109,0.00007833655,0.0001832194,0.0000327302,0.00001013926,0.000007938253,0.00004979581,0.00005509864,0.000001333035],"category_scores_gemma":[0.00004061414,0.00007424563,0.00003967659,0.0000972432,0.00004020089,0.00000756552,0.00006472103,0.00003173805,3.540587e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002992419,"about_ca_system_score_gemma":0.00007669462,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007242814,"about_ca_topic_score_gemma":0.00001201075,"domain_scores_codex":[0.9993998,0.00004474132,0.0001957986,0.0001686036,0.00009635921,0.00009473587],"domain_scores_gemma":[0.9996769,0.000006955418,0.00007829512,0.0001472477,0.00006318896,0.00002744109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004598155,0.0001961338,0.01861446,0.00004312365,0.00003078358,0.000001719387,0.00003592984,0.000001332705,0.9807143,0.0001096995,0.00001207802,0.000194474],"study_design_scores_gemma":[0.0007377315,0.00003629436,0.2139631,0.00002186026,0.00001013866,0.000001431735,0.00002644977,0.00003622231,0.784753,0.000003907458,0.0003528502,0.00005704697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986897,0.0006294128,0.0003458771,0.00003026049,0.00006411869,0.000132544,0.00004591383,0.000002023378,0.00006014589],"genre_scores_gemma":[0.9989549,0.0001687542,0.0003646271,0.0001375502,0.00003292452,0.00001180423,0.0002063514,0.000008640525,0.0001144564],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1959613,"threshold_uncertainty_score":0.3027649,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01167435805039707,"score_gpt":0.2372221737476988,"score_spread":0.2255478156973017,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}