{"id":"W3140230336","doi":"10.1016/j.micinf.2021.104816","title":"Defined gut microbial communities: promising tools to understand and combat disease","year":2021,"lang":"en","type":"review","venue":"Microbes and Infection","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Breakthrough T1D Canada; Canadian Institutes of Health Research","keywords":"Biology; Ecosystem; Ecology; Computational biology; Environmental resource management; Biotechnology; Data science; Computer science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009775064,0.001312623,0.001884062,0.001716526,0.0002447678,0.001883959,0.001042285,0.001635061,0.002937213],"category_scores_gemma":[0.001073851,0.0002957371,0.0003985391,0.002031841,0.0009584717,0.001968268,0.001208322,0.002913489,0.002403729],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009862046,"about_ca_system_score_gemma":0.001374325,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009952262,"about_ca_topic_score_gemma":0.002009915,"domain_scores_codex":[0.9997438,0.00004603544,0.00001871308,0.00004148573,0.0001188999,0.0000310446],"domain_scores_gemma":[0.9994774,0.0002502739,0.0000672977,0.00001981054,0.0001133267,0.00007190319],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001009271,0.00006293203,0.0001769093,0.01077761,0.00007198773,0.0001140813,0.00003165779,0.0004172931,0.005141994,0.01273707,0.03851646,0.931851],"study_design_scores_gemma":[0.00002149716,0.00007235177,0.0005189961,0.001906852,0.000085435,0.0004323728,0.00004642416,0.0001413348,0.0010672,0.005206899,0.9904758,0.00002480588],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00005474396,0.9983534,0.0003666601,0.0003026227,0.0002523336,0.000003116504,0.00002278008,0.000009245765,0.0006352279],"genre_scores_gemma":[0.0004386006,0.998201,0.0004092287,0.0002231215,0.0002380279,0.000006786794,0.00003593513,0.000001849178,0.0004453996],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002937213,"threshold_uncertainty_score":0.009826005,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05517214276722588,"score_gpt":0.3242113935267587,"score_spread":0.2690392507595328,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}