{"id":"W3141525448","doi":"10.1016/j.jbiotec.2021.03.016","title":"Proteomic analyses of the oleaginous and carotenogenic yeast Rhodotorula diobovata across growth phases under nitrogen- and oxygen-limited conditions","year":2021,"lang":"en","type":"article","venue":"Journal of Biotechnology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biochemistry; Lipogenesis; Biology; Aeration; Nitrogen assimilation; Yeast; Food science; Chemistry; Enzyme; Metabolism","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000123756,0.0001031178,0.000204801,0.00006492581,0.0000715156,0.00001216602,0.0001241962,0.0002078243,0.000003673509],"category_scores_gemma":[0.0001733315,0.00007525176,0.00008487517,0.0001974913,0.0002575786,0.000005095861,0.0001231704,0.0001726946,1.853079e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008045544,"about_ca_system_score_gemma":0.00006085375,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000015993,"about_ca_topic_score_gemma":0.000008206292,"domain_scores_codex":[0.9993343,0.00004279634,0.0002554257,0.000165087,0.00006627265,0.000136102],"domain_scores_gemma":[0.9993832,0.000003271778,0.0002026697,0.0002183454,0.0001592878,0.00003327183],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002409886,0.00004603963,0.000798255,0.00002013181,0.0001800166,0.000003780198,0.00001565671,0.0000279885,0.9983881,0.00005416565,0.0001267647,0.0003150773],"study_design_scores_gemma":[0.0004649186,0.000127231,0.008279155,0.00002486936,0.0000816456,0.001569237,0.0001216983,0.000004109364,0.9883539,0.0001583333,0.0007372111,0.00007766605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938419,0.00410194,0.0006824587,0.001070913,0.0001495189,0.00007828072,0.0000661473,0.000006065845,0.000002765654],"genre_scores_gemma":[0.9974864,0.001588606,0.0006860739,0.00006107696,0.0001218201,0.000001720887,0.00001029225,0.000009611845,0.00003438174],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0100341,"threshold_uncertainty_score":0.3068678,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01447962753733704,"score_gpt":0.2776983399034224,"score_spread":0.2632187123660853,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}