{"id":"W3141884032","doi":"10.1101/2021.03.31.437793","title":"Virulence shift in Type X <i>Toxoplasma gondii</i> : natural cross QTL identifies ROP33 as rodent Vir locus","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Locus (genetics); Genetics; Population; Genome; Virulence; Genotype; Allele; Gene; Toxoplasma gondii","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001541589,0.0001922114,0.000118604,0.0003315393,0.0001177832,0.0001919251,0.000187973,0.0001349301,0.0012977],"category_scores_gemma":[0.0001227454,0.0001455235,0.0001613044,0.0001593419,0.0001792126,0.00006624675,0.0002146797,0.0003700217,0.0001608106],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001874591,"about_ca_system_score_gemma":0.00009333318,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001173428,"about_ca_topic_score_gemma":0.00243902,"domain_scores_codex":[0.999893,0.00001479863,0.000007646637,0.00004207978,0.00001805872,0.000024391],"domain_scores_gemma":[0.9998173,0.0000247566,0.00007753483,0.00002024657,0.00001771155,0.00004237758],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001812942,0.00003316764,0.03554102,0.0000160745,0.00002030206,0.0001191956,0.00008189912,0.00006094816,0.9620929,0.00008332748,0.00003512314,0.001734722],"study_design_scores_gemma":[0.00001842057,0.0004220883,0.9051055,0.0000116892,0.00004972478,0.001353883,0.000278606,0.0008649355,0.09089425,0.00006943907,0.0009206206,0.00001087444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994133,0.00002283456,0.0003047266,0.000006399339,0.000001091646,0.000003072346,0.00009523488,0.000005836102,0.000147572],"genre_scores_gemma":[0.9989868,0.00002592814,0.0003775106,0.00001486655,0.000001368497,0.000004942623,0.0002340774,0.000008182667,0.0003463672],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0012977,"threshold_uncertainty_score":0.004341304,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01200708576025314,"score_gpt":0.2572428283889729,"score_spread":0.2452357426287197,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}