{"id":"W3146802560","doi":"10.1186/s12866-021-02159-5","title":"Azithromycin and the microbiota of cystic fibrosis sputum","year":2021,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary General Hospital; McMaster University; University of Calgary","funders":"Canadian Institutes of Health Research; Calgary Laboratory Services","keywords":"Azithromycin; Cystic fibrosis; Microbiome; Sputum; Biology; Internal medicine; Medicine; Microbiology; Antibiotics; Bioinformatics; Pathology; Tuberculosis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000268569,0.000131376,0.0004730147,0.00005857721,0.00005938909,0.00001081346,0.0001085291,0.00009653104,0.0003018914],"category_scores_gemma":[0.001045235,0.00008350121,0.0001090949,0.0002024328,0.001016255,0.00002285245,0.0002036703,0.0001695629,0.00003932806],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002514228,"about_ca_system_score_gemma":0.0002302094,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004786678,"about_ca_topic_score_gemma":0.00006676166,"domain_scores_codex":[0.9988056,0.0002459166,0.0002989236,0.0003053314,0.00005103239,0.0002931467],"domain_scores_gemma":[0.9982387,0.001051261,0.00008355473,0.0003986227,0.0001602234,0.00006760107],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006292071,0.00005200714,0.002068535,0.00025696,0.00005877536,0.00001396713,0.0001131861,0.000003180593,0.9932746,0.000527092,0.002484913,0.0005175655],"study_design_scores_gemma":[0.01370814,0.000714112,0.03643855,0.0005204455,0.0003066091,0.005748369,0.0006985685,0.0001622584,0.8509346,0.0008752131,0.08955041,0.0003427406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9775994,0.01837978,0.0009558774,0.001597369,0.0001886323,0.0004636612,0.0001324492,0.00002634994,0.0006564322],"genre_scores_gemma":[0.9661959,0.0004215367,0.03093358,0.0003285968,0.00009418216,0.00001705154,0.0001315294,0.0000223732,0.001855275],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.14234,"threshold_uncertainty_score":0.3744435,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01120343787151177,"score_gpt":0.2738379096358938,"score_spread":0.262634471764382,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}