{"id":"W3147554020","doi":"10.1016/j.ygeno.2021.04.004","title":"Key genetic variants associated with variation of milk oligosaccharides from diverse human populations","year":2021,"lang":"en","type":"article","venue":"Genomics","topic":"Infant Nutrition and Health","field":"Nursing","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"Medical Research Council; Washington State University; U.S. Department of Agriculture; National Institute of Food and Agriculture; National Science Foundation","keywords":"Biology; Balancing selection; Genome; Selection (genetic algorithm); Genome-wide association study; Genetic association; Genetic variation; Genetics; Genetic variants; Gene; Genotype; Single-nucleotide polymorphism","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008197111,0.00008769016,0.0001743911,0.0000617388,0.0002218493,0.00002764558,0.00007119864,0.00009060076,0.0002117329],"category_scores_gemma":[0.00004742802,0.00009694595,0.00003976671,0.0001574547,0.00002283438,0.00006326372,0.00002299609,0.00009212211,0.00001602328],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001568468,"about_ca_system_score_gemma":0.00006815269,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001005667,"about_ca_topic_score_gemma":0.001470702,"domain_scores_codex":[0.9991643,0.00008355544,0.00027253,0.0001826004,0.0001305685,0.0001663964],"domain_scores_gemma":[0.9993457,0.00004001393,0.0001900507,0.0002024362,0.0001660156,0.0000558119],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004463789,0.001801508,0.3170028,0.0001727274,0.0005369714,0.00008596735,0.03875516,0.003740212,0.6091279,0.02095265,0.00398273,0.003395034],"study_design_scores_gemma":[0.001166421,0.0000706891,0.9860977,0.00005824259,0.000110785,0.000003203697,0.0002198791,0.001086582,0.003289486,0.007403836,0.0003476644,0.0001455193],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973121,0.00008924285,0.000900423,0.000422709,0.000351126,0.000132059,0.0003790108,0.00003628962,0.0003770134],"genre_scores_gemma":[0.9886524,0.00002062457,0.01012434,0.0004006789,0.0001152135,0.000003240307,0.000622509,0.00001786102,0.00004314334],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6690949,"threshold_uncertainty_score":0.3953341,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04288795226260451,"score_gpt":0.281373479378941,"score_spread":0.2384855271163365,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}