{"id":"W3147713100","doi":"10.1080/19490976.2021.1902705","title":"The Impact of Migration on the Gut Metagenome of South Asian Canadians","year":2021,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Sinai Hospital; University of Ottawa; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Metagenomics; Prevotella; Biology; Dominance (genetics); Gut flora; Relative species abundance; Immigration; Microbiome; Abundance (ecology); Ecology; Immunology; Bioinformatics; Geography; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001589206,0.00009875775,0.0001223708,0.00002090055,0.0001203598,0.00001565474,0.000166874,0.00007341463,0.00004541736],"category_scores_gemma":[0.00005570224,0.00005627056,0.0001603808,0.00008947452,0.00008811222,0.000001225611,0.00003674976,0.00006894155,0.000006774084],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002027848,"about_ca_system_score_gemma":0.0003986947,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002527947,"about_ca_topic_score_gemma":0.0111806,"domain_scores_codex":[0.9993291,0.00008934217,0.0001910776,0.0001507643,0.00004789811,0.0001918296],"domain_scores_gemma":[0.9993271,0.00001904313,0.0001089633,0.0003951499,0.0001067957,0.00004292434],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001837284,0.00002437886,0.0009759886,0.000009429416,0.00008639739,8.646372e-7,0.0004954803,0.00002295243,0.9922966,0.0001744233,0.00555616,0.0003389835],"study_design_scores_gemma":[0.0002901788,0.0003403958,0.07132796,0.00002859581,0.00004048081,0.000020233,0.001685667,0.000007194853,0.8945045,0.00008008462,0.03152008,0.0001545798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957047,0.001498066,0.00002595775,0.001339186,0.00004918256,0.0001174682,0.0001760185,0.000001960829,0.001087451],"genre_scores_gemma":[0.9983016,0.0002303984,0.00006236074,0.0001862444,0.00005589893,0.00000332756,0.00008290735,0.00001074262,0.001066483],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09779202,"threshold_uncertainty_score":0.6239038,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009855088686643263,"score_gpt":0.2544211197881802,"score_spread":0.244566031101537,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}