{"id":"W3151328747","doi":"10.1099/mic.0.001041","title":"From infection niche to therapeutic target: the intracellular lifestyle of Mycobacterium tuberculosis","year":2021,"lang":"en","type":"review","venue":"Microbiology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Phagosome; Tuberculosis; Mycobacterium tuberculosis; Intracellular; Biology; Obligate; Intracellular parasite; Pathogen; Human pathogen; Microbiology; Immunology; Medicine; Cell biology; Genetics; Gene; Ecology; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009708688,0.0004638532,0.003038893,0.0002360021,0.00007224128,0.00001297934,0.0002990931,0.0009283901,0.001235001],"category_scores_gemma":[0.001154797,0.0002753241,0.00090532,0.0005083487,0.0002272768,0.00002086807,0.0002968413,0.001021805,0.0004791045],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001714387,"about_ca_system_score_gemma":0.0004373515,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009286675,"about_ca_topic_score_gemma":0.00006332721,"domain_scores_codex":[0.9954563,0.002094074,0.001040812,0.0007021017,0.000081667,0.0006249817],"domain_scores_gemma":[0.9968313,0.001452446,0.0003180568,0.001010213,0.0002005457,0.0001874375],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000123906,0.0005129871,0.001929094,0.008743215,0.006749085,0.0001204042,0.0003564758,0.000003382891,0.07360373,0.0001157794,0.05624573,0.8514962],"study_design_scores_gemma":[0.0001607984,0.0002726026,0.0002102883,0.002912757,0.001177251,0.0004627908,0.00001333382,0.000001917554,0.0007476644,0.00001595805,0.9937971,0.0002275967],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002025128,0.9923863,0.0001499844,0.002936314,0.0006774648,0.001363473,0.000295395,0.00003592807,0.0001300243],"genre_scores_gemma":[0.0002742245,0.9941151,0.0003566731,0.001686442,0.0009359073,0.0002489382,0.001991528,0.0000670825,0.0003240606],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9375513,"threshold_uncertainty_score":0.9999699,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03957297014326887,"score_gpt":0.3486398586169915,"score_spread":0.3090668884737226,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}