{"id":"W3152032787","doi":"","title":"Insights from molecular evidence of Mycobacterium leprae from 15th century Normandy, France","year":2018,"lang":"en","type":"preprint","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Leprosy Research and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Center for Northern Studies; Institute of Infection and Immunity","funders":"","keywords":"Mycobacterium leprae; Leprosy; Paleopathology; Genotype; DNA extraction; Ancient DNA; Biology; Lepromatous leprosy; Microbiology; DNA; Polymerase chain reaction; Genetics; Immunology; Gene; Medicine; Population; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009181107,0.0004133586,0.0007057494,0.0001743193,0.0001506083,0.0001565814,0.000930991,0.0003675184,0.0003927512],"category_scores_gemma":[0.001347139,0.0003730507,0.0003149819,0.0002876462,0.0004149112,0.0001596133,0.001404913,0.0007364656,0.0001534612],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001753892,"about_ca_system_score_gemma":0.0006362086,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008712947,"about_ca_topic_score_gemma":0.0006840427,"domain_scores_codex":[0.994713,0.002356899,0.0006407861,0.0010359,0.0008813587,0.0003720408],"domain_scores_gemma":[0.9919758,0.001095924,0.0005390571,0.003366065,0.002640595,0.0003825936],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001541237,0.008224199,0.1806385,0.002774806,0.003952011,0.0005486417,0.03516923,0.00002698867,0.6926197,0.009145828,0.003955977,0.06140282],"study_design_scores_gemma":[0.002472703,0.00000858296,0.1431391,0.01690335,0.000403957,0.000006676508,0.00008851853,0.002129091,0.8205244,0.004819682,0.008875621,0.0006283722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.956844,0.02140956,0.008384431,0.003763097,0.0003004968,0.0008912109,0.0002722848,0.0001269053,0.008007957],"genre_scores_gemma":[0.9758331,0.002956597,0.01794123,0.0001278796,0.00008232289,0.00009246112,0.001587815,0.00005383439,0.00132475],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1279046,"threshold_uncertainty_score":0.9998721,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01758755232136245,"score_gpt":0.2659793363264166,"score_spread":0.2483917840050541,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}