{"id":"W3152639634","doi":"10.1186/s12864-021-07592-4","title":"RNA sequencing describes both population structure and plasticity-selection dynamics in a non-model fish","year":2021,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Western Canada Research Grid; Compute Canada","keywords":"Biology; Genetics; Population; Transcriptome; Evolutionary biology; Computational biology; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006599517,0.0001758592,0.0002184644,0.0005501479,0.0002709631,0.0004821364,0.0002684276,0.0003545227,0.000666906],"category_scores_gemma":[0.00140519,0.0001700567,0.0002617153,0.0005425393,0.0004369158,0.0004831672,0.0002289758,0.000292658,0.000266915],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004529458,"about_ca_system_score_gemma":0.0002637377,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007079253,"about_ca_topic_score_gemma":0.001733908,"domain_scores_codex":[0.9996232,0.00004741048,0.0000245588,0.0002059107,0.00007870082,0.00002030727],"domain_scores_gemma":[0.9986838,0.0004722797,0.0004241789,0.0001829137,0.0001993781,0.00003745767],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001229793,0.00004857286,0.1337676,0.000174878,0.0001742243,0.0001525359,0.0004053309,0.004564343,0.8318739,0.00161827,0.0001686349,0.02692874],"study_design_scores_gemma":[0.00001736115,0.0004668925,0.8328934,0.00004098223,0.0002769026,0.0009533986,0.0003951529,0.02737298,0.1207562,0.006375195,0.01039906,0.00005237745],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9390733,0.000424703,0.05714234,0.0001083377,0.00001608913,0.0000362723,0.001010517,0.0001272339,0.002061296],"genre_scores_gemma":[0.9727114,0.0002634938,0.02437525,0.0001272063,0.00002569984,0.0001200904,0.001492402,0.0000715643,0.0008128438],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007079253,"threshold_uncertainty_score":0.00349021,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01324503453351794,"score_gpt":0.2179449758606036,"score_spread":0.2046999413270856,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}